CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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csin108146
(
Clonorchis sinensis
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
csin108146
T336129_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
csin108146
Sox
11
78
PRKPPTAFMLYVKQRRLQSEQLASLAFGERNRILGSEWSNLPADQKAGFFNEAKELRDKYTQLLAEYK
Links
Other
Sox
family TFs
Other
Clonorchis sinensis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
fgenesh1_pm.00153_#_150
Aspergillus carbonarius
fgenesh1_pm.00153_#_150
N
AFUA_5G02880
Aspergillus fumigatus
CADAFUAG00002853
N
BBA_04937
Beauveria bassiana
BBA_04937
N
CCM_08648
Cordyceps militaris
CCM_08648
N
FGRRES_02787_M
Fusarium graminearum
FGRRES_02787_M
N
UCRNP2_4074
Neofusicoccum parvum
UCRNP2_4074
N
NEUTE1DRAFT_106151
Neurospora tetrasperma
NEUTE1DRAFT_106151
N
TRIVIDRAFT_28800
Trichoderma virens
TRIVIDRAFT_28800
N