genemark-nMf.1.1.scaf06964-processed-gene-0.3 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 genemark-nMf.1.1.scaf06964-processed-gene-0.3 T336323_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
genemark-nMf.1.1.scaf06964-processed-gene-0.3-mRNA-1 Sox 62 130
genemark-nMf.1.1.scaf06964-processed-gene-0.3-mRNA-1 Sox 148 216

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

155 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_189288 Agaricus bisporus AGABI2DRAFT_189288 N
M378DRAFT_174679 Amanita muscaria M378DRAFT_174679 N
BOTBODRAFT_56815 Botryobasidium botryosum BOTBODRAFT_56815 N
CERSUDRAFT_110850 Ceriporiopsis subvermispora CERSUDRAFT_110850 N
CC1G_00612 Coprinopsis cinerea CC1G_00612 N
FIBRA_04336 Fibroporia radiculosa FIBRA_04336 I
GALMADRAFT_132473 Galerina marginata GALMADRAFT_132473 N
GLOTRDRAFT_134845 Gloeophyllum trabeum GLOTRDRAFT_134845 N
M413DRAFT_6767 Hebeloma cylindrosporum M413DRAFT_6767 N
HETIRDRAFT_431289 Heterobasidion irregulare HETIRDRAFT_431289 N
JAAARDRAFT_44019 Jaapia argillacea JAAARDRAFT_44019 N
K443DRAFT_105165 Laccaria amethystina K443DRAFT_105165 I
LACBIDRAFT_297628 Laccaria bicolor LACBIDRAFT_297628 N
PAXINDRAFT_100475 Paxillus involutus PAXINDRAFT_100475 N
PAXRUDRAFT_824657 Paxillus rubicundulus PAXRUDRAFT_824657 N
PHACADRAFT_204947 Phanerochaete carnosa PHACADRAFT_204947 N
fgenesh1_pg.C_scaffold_18000074 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_18000074 N
PHLGIDRAFT_50338 Phlebiopsis gigantea PHLGIDRAFT_50338 N
PISMIDRAFT_671894 Pisolithus microcarpus PISMIDRAFT_671894 N
M404DRAFT_137431 Pisolithus tinctorius M404DRAFT_137431 N
PLEOSDRAFT_1075550 Pleurotus ostreatus PLEOSDRAFT_1075550 I
POSPLDRAFT_106191 Postia placenta POSPLDRAFT_106191 N
SCHCODRAFT_238623 Schizophyllum commune SCHCODRAFT_238623 I
SCLCIDRAFT_119671 Scleroderma citrinum SCLCIDRAFT_119671 N
SERLA73DRAFT_78978 Serpula lacrymans SERLA73DRAFT_78978 N
SPPG_03931 Spizellomyces punctatus SPPG_03931 I
CY34DRAFT_810493 Suillus luteus CY34DRAFT_810493 N
BN946_scf184867.g15 Trametes cinnabarina BN946_scf184867.g15 N
M407DRAFT_128179 Tulasnella calospora M407DRAFT_128179 N