CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HNAJ_0001249801
(
Hymenolepis nana
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
HNAJ_0001249801
T336457_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HNAJ_0001249801-mRNA-1
Sox
11
81
PKGPMSAYACFVQVIREEHKKKHPGEHIVFSDFSRKCAERWKIMTPKEKKRFEDMAALDKDRYNREMNDYV
HNAJ_0001249801-mRNA-1
Sox
101
167
PKRALSAFFFFCDDFRQEVRDEHPEWKVGDISKELGRRWEECTDKSKYDLLAQQDKQRYEEDMNKYR
Links
Other
Sox
family TFs
Other
Hymenolepis nana
TFs
228 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LPERR02G03850
Leersia perrieri
LPERR02G03850
N
LPERR06G21240
Leersia perrieri
LPERR06G21240
N
OBART02G04420
Oryza barthii
OBART02G04420
N
ORGLA02G0040900
Oryza glaberrima
ORGLA02G0040900
N
OGLUM02G04330
Oryza glumaepatula
OGLUM02G04330
N
ONIVA02G04420
Oryza nivara
ONIVA02G04420
N
Pavir.Db00303
Panicum virgatum
Pavir.Db00303
N
Sb10g028110
Sorghum bicolor
Sb10g028110
N
GRMZM2G175543
Zea mays
GRMZM2G175543
N
GRMZM2G322672
Zea mays
GRMZM2G322672
N