HPBE_0001808001 (Heligmosomoides bakeri)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 HPBE_0001808001 T336467_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
HPBE_0001808001-mRNA-1 Sox 34 90
HPBE_0001808001-mRNA-1 Sox 129 198

Links

Other Sox family TFs
Other Heligmosomoides bakeri TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_04036 Aegilops tauschii F775_04036 N
BRADI2G11240 Brachypodium distachyon BRADI2G11240 N
MLOC_34539 Hordeum vulgare MLOC_34539 N
LPERR01G11190 Leersia perrieri LPERR01G11190 N
OBART01G12250 Oryza barthii OBART01G12250 N
OBART01G12270 Oryza barthii OBART01G12270 N
OB01G22010 Oryza brachyantha OB01G22010 N
ORGLA01G0103500 Oryza glaberrima ORGLA01G0103500 N
OGLUM01G13730 Oryza glumaepatula OGLUM01G13730 N
OLONG_017800 Oryza longistaminata OLONG_017800 N
ONIVA01G14480 Oryza nivara ONIVA01G14480 N
OPUNC01G11960 Oryza punctata OPUNC01G11960 N
ORUFI01G13230 Oryza rufipogon ORUFI01G13230 N
SPL1 Oryza sativa OS01G0292900 N
Pavir.Ea01625 Panicum virgatum Pavir.Ea01625 N
Pavir.Eb01272 Panicum virgatum Pavir.Eb01272 N
Si000259m.g Setaria italica Si000259m.g N
Sb03g011920 Sorghum bicolor Sb03g011920 N
Traes_7AS_FB2A769B5 Triticum aestivum Traes_7AS_FB2A769B5 N
Traes_7BS_7ACA0B10A Triticum aestivum Traes_7BS_7ACA0B10A N
Traes_7DS_3880F0FD0 Triticum aestivum Traes_7DS_3880F0FD0 N
TRIUR3_24010 Triticum urartu TRIUR3_24010 N
GRMZM2G133646 Zea mays GRMZM2G133646 N
GRMZM2G081127 Zea mays GRMZM2G081127 N