CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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L889_g16824
(
Steinernema feltiae
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
L889_g16824
T336513_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
L889_g16824.t1
Sox
899
962
DKATKAAVLYANITRPNLRNEYPEWSERQKQITRMWRALAQEERMKYVTKARENRTNRTKMARP
L889_g16824.t2
Sox
899
962
DKATKAAVLYANITRPNLRNEYPEWSERQKQITRMWRALAQEERMKYVTKARENRTNRTKMARP
Links
Other
Sox
family TFs
Other
Steinernema feltiae
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Bm5193
Brugia malayi
Bm5193
N
0.000
BTMF_0001049501
Brugia timori
BTMF_0001049501
N
0.000
nDi.2.2.2.g04995
Dirofilaria immitis
nDi.2.2.2.g04995
N
0.000
EVEC_0000082801
Enterobius vermicularis
EVEC_0000082801
N
0.000
Hba_13962
Heterorhabditis bacteriophora
Hba_13962
N
0.000
LOAG_18198
Loa loa
LOAG_18198
N
0.000
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
Meloidogyne floridensis
snap_masked-nMf.1.1.scaf15800-processed-gene-0.1
N
0.000
OFLC_0001389501
Onchocerca flexuosa
OFLC_0001389501
N
0.000
nOo.2.0.1.g00989
Onchocerca ochengi
nOo.2.0.1.g00989
N
0.000
WBGene00240603
Onchocerca volvulus
WBGene00240603
N
0.000
PEQ_0000470601
Parascaris equorum
PEQ_0000470601
N
0.000
L596_g5733
Steinernema carpocapsae
L596_g5733
N
0.000
SMUV_0000902201
Syphacia muris
SMUV_0000902201
N
0.000
WUBG_03267
Wuchereria bancrofti
WUBG_03267
N
0.000