maker-nMf.1.1.scaf01126-augustus-gene-0.13 (Meloidogyne floridensis)
Sox

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00505 (HMG_box) IPR000910 maker-nMf.1.1.scaf01126-augustus-gene-0.13 T336591_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
maker-nMf.1.1.scaf01126-augustus-gene-0.13-mRNA-1 Sox 20 88

Links

Other Sox family TFs
Other Meloidogyne floridensis TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR03G28140 Leersia perrieri LPERR03G28140 N 0.000
OBART03G33610 Oryza barthii OBART03G33610 N 0.000
ORGLA03G0304100 Oryza glaberrima ORGLA03G0304100 N 0.000
OGLUM03G33270 Oryza glumaepatula OGLUM03G33270 N 0.000
BGIOSGA013533 Oryza indica BGIOSGA013533 N 0.000
OLONG_003946 Oryza longistaminata OLONG_003946 N 0.000
OMERI03G31010 Oryza meridionalis OMERI03G31010 N 0.000
ONIVA10G02990 Oryza nivara ONIVA10G02990 N 0.000
OPUNC03G30800 Oryza punctata OPUNC03G30800 N 0.000
ORUFI03G34980 Oryza rufipogon ORUFI03G34980 N 0.000
BHLH148 Oryza sativa OS03G0741100 N 0.000