CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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MCOS_0000638801
(
Mesocestoides corti
)
Sox
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00505 (HMG_box)
IPR000910
MCOS_0000638801
T336603_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
MCOS_0000638801-mRNA-1
Sox
17
62
HVFPAYVKLHFHEVKNCNPTLKAPEILKKLSEMYKATSPAELAKLN
MCOS_0000638801-mRNA-1
Sox
95
162
KPQPLTGYMVFIHEKLSGNKGLSLQDMTAKLSDASKAWQNLPESNKEAYNMRASENKLSHLRDLKAWA
Links
Other
Sox
family TFs
Other
Mesocestoides corti
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
F775_22930
Aegilops tauschii
F775_22930
N
Aquca_009_00095
Aquilegia coerulea
Aquca_009_00095
N
WRI1
Arabidopsis thaliana
AT3G54320
I
ADAP
Arabidopsis thaliana
AT1G16060
I
Bostr.7128s0222
Boechera stricta
Bostr.7128s0222
N
PK11678.1
Cannabis sativa
PK11678.1
N
Cucsa.005540
Cucumis sativus
Cucsa.005540
N
Eucgr.G02636
Eucalyptus grandis
Eucgr.G02636
N
Gorai.009G008800
Gossypium raimondii
Gorai.009G008800
I
Gorai.009G122000
Gossypium raimondii
Gorai.009G122000
I
mgf003341m
Mimulus guttatus
mgf003341m
N
OBART08G16250
Oryza barthii
OBART08G16250
N
OGLUM06G02990
Oryza glumaepatula
OGLUM06G02990
N
BGIOSGA021939
Oryza indica
BGIOSGA021939
N
Pavir.Fb01620
Panicum virgatum
Pavir.Fb01620
N
Pavir.J37767
Panicum virgatum
Pavir.J37767
N
SapurV1A.0153s0330
Salix purpurea
SapurV1A.0153s0330
I
PGSC0003DMG400014157
Solanum tuberosum
PGSC0003DMG400014157
N
PGSC0003DMG400028913
Solanum tuberosum
PGSC0003DMG400028913
N
Traes_5DL_B49D156B7
Triticum aestivum
Traes_5DL_B49D156B7
N
GRMZM2G174834
Zea mays
GRMZM2G174834
I
GRMZM2G131266
Zea mays
GRMZM2G131266
N