CpipJ_CPIJ007784 (Culex pipiens)
T-box

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00907 (T-box) IPR001699 CpipJ_CPIJ007784 T339225_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
org-1
M03988_2.00 		Drosophila melanogaster
DRGTGTBAD
HTVACACYH		 SELEX
Nitta et al.(2015)
org-1_1 		0.755 0.753
org-1
M03989_2.00 		Drosophila melanogaster
TRACACYTARGTGTGA
TCACACYTARGTGTYA		 SELEX
Nitta et al.(2015)
org-1_2 		0.755 0.753
Tbx1
M00832_2.00 		Mus musculus
NRGTGTGAANN
NNTTCACACYN		 PBM
Weirauch et al.(2013)
pTH3822 		0.744 0.703
TBX1
M03570_2.00 		Homo sapiens
ARGTGTKAAAWHARGTGTGA
TCACACYTDWTTTMACACYT		 SELEX
Jolma et al.(2013)
TBX1_1 		0.744 0.703
TBX1
M03571_2.00 		Homo sapiens
AGGTGTGAWWTTCACACCT
AGGTGTGAAWWTCACACCT		 SELEX
Jolma et al.(2013)
TBX1_2 		0.744 0.703
TBX1
M03572_2.00 		Homo sapiens
AGGTGTGA
TCACACCT		 SELEX
Jolma et al.(2013)
TBX1_3 		0.744 0.703
TBX1
M03573_2.00 		Homo sapiens
YYTCACACMTYWRAGGTGTGAAA
TTTCACACCTYWRAKGTGTGARR		 SELEX
Jolma et al.(2013)
TBX1_4 		0.744 0.703
TBX1
M03574_2.00 		Homo sapiens
YTCACACCTDKAGGTGTGAA
TTCACACCTMHAGGTGTGAR		 SELEX
Jolma et al.(2013)
TBX1_5 		0.744 0.703
TBX1
M05821_2.00 		Homo sapiens
BDRGGTGTGARV
BYTCACACCYHV		 SELEX
Yin et al.(2017)
TBX1_eDBD_HT-SELEX 		0.744 0.703
Tbx1
M11386_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBX1_07 		0.744 0.703
TBX1
M05822_2.00 		Homo sapiens
DNWGGTGTGARN
NYTCACACCWNH		 SELEX
Yin et al.(2017)
TBX1_eDBD_Methyl-HT-SELEX 		0.744 0.703
For this family, TFs with SR scores > 0.734 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ007784-RA T-box 181 371

Links

Other T-box family TFs
Other Culex pipiens TFs

115 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_02790 Aegilops tauschii F775_02790 N
Ca_06997 Cicer arietinum Ca_06997 N
Thhalv10017520m.g Eutrema salsugineum Thhalv10017520m.g N
GLYMA01G32890 Glycine max GLYMA01G32890 I
GLYMA02G00981 Glycine max GLYMA02G00981 N
GLYMA03G32747 Glycine max GLYMA03G32747 I
MLOC_10815 Hordeum vulgare MLOC_10815 I
MLOC_77331 Hordeum vulgare MLOC_77331 I
MLOC_49032 Hordeum vulgare MLOC_49032 N
Lus10021416.g Linum usitatissimum Lus10021416.g N
OB03G34880 Oryza brachyantha OB03G34880 N
OB06G13990 Oryza brachyantha OB06G13990 I
OLONG_008764 Oryza longistaminata OLONG_008764 N
OLONG_014962 Oryza longistaminata OLONG_014962 I
OLONG_024366 Oryza longistaminata OLONG_024366 N
OMERI10G14830 Oryza meridionalis OMERI10G14830 N
PGSC0003DMG400024523 Solanum tuberosum PGSC0003DMG400024523 N
Sb01g029220 Sorghum bicolor Sb01g029220 N
Traes_6DL_C8198CD4A Triticum aestivum Traes_6DL_C8198CD4A N
Traes_7BS_F67ED5C9E Triticum aestivum Traes_7BS_F67ED5C9E I
Traes_7DS_0536E73E5 Triticum aestivum Traes_7DS_0536E73E5 I
Traes_5DL_C6C077BB9 Triticum aestivum Traes_5DL_C6C077BB9 N
Traes_5AL_85F3BE385 Triticum aestivum Traes_5AL_85F3BE385 N
GRMZM2G030744 Zea mays GRMZM2G030744 I