CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
TBX5
(
Choloepus hoffmanni
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSCHOG00000002038
T339676_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSCHOP00000001799
T-box
31
57
VFLHERELWLKFHEAGTEMIITAGXXX
ENSCHOP00000001799
T-box
90
212
XXXXXXSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRG
ENSCHOP00000001801
T-box
31
57
VFLHERELWLKFHEAGTEMIITAGXXX
ENSCHOP00000001801
T-box
90
212
XXXXXXSVTGKAEPAMPGRLYVHPDSPATGAHWMRQLVSFQKLKLTNNHLDPFGHIILNSMHKYQPRLHIVKADENNGFGSKNTAFCTHVFPETAFIAVTSYQNHKITQLKIENNPFAKGFRG
Links
Other
T-box
family TFs
Other
Choloepus hoffmanni
TFs
1 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Ciclev10011580m.g
Citrus clementina
Ciclev10011580m.g
N
orange1.1g012725m.g
Citrus sinensis
orange1.1g012725m.g
N
Eucgr.K01667
Eucalyptus grandis
Eucgr.K01667
N
Gorai.007G351800
Gossypium raimondii
Gorai.007G351800
N
PRUPE_ppa004791mg
Prunus persica
PRUPE_ppa004791mg
N
30180.m001023
Ricinus communis
30180.m001023
N
TCM_023871
Theobroma cacao
TCM_023871
N