CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TBX21
(
Felis catus
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00907 (T-box)
IPR001699
ENSFCAG00000010607
T339876_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TBX21
M03546_2.00
Homo sapiens
GGTGTGAHDTMACACY
RGTGTKAHDTCACACC
SELEX
Jolma et al.(2013)
TBX21_1
0.920
0.989
TBX21
M03547_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_2
0.920
0.989
TBX21
M03548_2.00
Homo sapiens
TMACACYTNNDAGGTGTGA
TCACACCTHNNARGTGTKA
SELEX
Jolma et al.(2013)
TBX21_3
0.920
0.989
TBX21
M03549_2.00
Homo sapiens
GGTGTGAWATCACACC
GGTGTGATWTCACACC
SELEX
Jolma et al.(2013)
TBX21_4
0.920
0.989
TBX21
M03550_2.00
Homo sapiens
DAGGTGTGAW
WTCACACCTH
SELEX
Jolma et al.(2013)
TBX21_5
0.920
0.989
TBX21
M03551_2.00
Homo sapiens
TSACACCWNMRAGGTGTGA
TCACACCTYKNWGGTGTSA
SELEX
Jolma et al.(2013)
TBX21_6
0.920
0.989
TBX21
M05793_2.00
Homo sapiens
DAGGTGTKAN
NTMACACCTH
SELEX
Yin et al.(2017)
TBX21_eDBD_HT-SELEX
0.920
0.989
TBX21
M09425_2.00
Homo sapiens
NDSDRGSTGWBRN
NYVWCASCYHSHN
Misc
Kulakovskiy et al.(2013)
TBX21_HUMAN.H11MO.0.A
0.920
0.989
TBX21
M05794_2.00
Homo sapiens
DASGTGTKAW
WTMACACSTH
SELEX
Yin et al.(2017)
TBX21_eDBD_Methyl-HT-SELEX
0.920
0.989
Tbx21
M09428_2.00
Mus musculus
DNDDSTGWSDND
HNHSWCASHHNH
Misc
Kulakovskiy et al.(2013)
TBX21_MOUSE.H11MO.0.A
0.920
0.984
Tbx21
M09648_2.00
Mus musculus
ADGTGWSAHN
NDTSWCACHT
Misc
Heinz et al.(2010)
CD8-Tbet_GSE33802
0.920
0.984
Eomes
M00215_2.00
Mus musculus
RDGTGYBANN
NNTVRCACHY
PBM
Badis et al.(2009)
Eomes_0921
0.812
0.754
EOMES
M03563_2.00
Homo sapiens
DAGGTGTGAWNNN
NNNWTCACACCTH
SELEX
Jolma et al.(2013)
EOMES_1
0.812
0.749
EOMES
M03564_2.00
Homo sapiens
TVACACNTNNNDRNGTGTGA
TCACACNYHNNNANGTGTBA
SELEX
Jolma et al.(2013)
EOMES_2
0.812
0.749
EOMES
M02752_2.00
Homo sapiens
AGGTGTGAW
WTCACACCT
SELEX
Jolma et al.(2010)
EOMES_monomer
0.812
0.749
EOMES
M05807_2.00
Homo sapiens
DAGGTGTGAN
NTCACACCTH
SELEX
Yin et al.(2017)
EOMES_eDBD_HT-SELEX
0.812
0.749
EOMES
M09647_2.00
Homo sapiens
ARGTGWKAAN
NTTMWCACYT
Misc
Heinz et al.(2010)
H9-Eomes_GSE26097
0.812
0.749
EOMES
M05808_2.00
Homo sapiens
NABGTGYKAH
DTMRCACVTN
SELEX
Yin et al.(2017)
EOMES_eDBD_Methyl-HT-SELEX
0.812
0.749
Tbr1
M01028_2.00
Mus musculus
DTVRCAMNYH
DRNKTGYBAH
PBM
SebePedros et al.(2013)
pTH2659
0.766
0.738
TBR1
M03560_2.00
Homo sapiens
AGGTGTGAAN
NTTCACACCT
SELEX
Jolma et al.(2013)
TBR1_1
0.766
0.738
TBR1
M03561_2.00
Homo sapiens
RAGGTGTGAAH
DTTCACACCTY
SELEX
Jolma et al.(2013)
TBR1_2
0.766
0.738
For this family, TFs with SR scores >
0.734
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSFCAP00000009847
T-box
28
215
VALNNHLLWSKFNQHQTEMIITKQGRRMFPFLSFTVAGLEPTSHYRMFVDVVLVDQHHWRYQSGKWVQCGKAEGNMPGNRLYVHPDSPNTGAHWMRQEVSFGKLKLTNNKGASNNVTQMIVLQSLHKYQPRLHIVEVNDGEPEAACNASNTHVFTFQETQFIAVTAYQNAEITQLKIDNNPFAKGFRE
Links
Other
T-box
family TFs
Other
Felis catus
TFs
161 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CCM_04014
Cordyceps militaris
CCM_04014
N
FFUJ_04092
Fusarium fujikuroi
FFUJ_04092
I
FGRRES_09308
Fusarium graminearum
FGRRES_09308
I
FOXG_05924
Fusarium oxysporum
FOXG_05924
I
FPSE_09709
Fusarium pseudograminearum
FPSE_09709
I
FVEG_03795
Fusarium verticillioides
FVEG_03795
I
estExt_fgenesh1_pg.C_sca_18_chr2_1_00990
Nectria haematococca
estExt_fgenesh1_pg.C_sca_18_chr2_1_00990
N
TRIVIDRAFT_178515
Trichoderma virens
TRIVIDRAFT_178515
N