CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NBR_0000902401
(
Nippostrongylus brasiliensis
)
T-box
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00907 (T-box)
IPR001699
NBR_0000902401
T341823_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
NBR_0000902401-mRNA-1
T-box
85
252
FRLTRMFPTVKVSISNIDTDGLYYVFLDVIPVDNKRYRYIYNKSAWLTAGKAEPAPKNRLYLHPDSPYTGEQLLKQVVSFEKAKLTNNEIDKAGHLILNSMHKYQPRIHVVRRSKGQHLDQNKMNLADEVHRTFVFTETQFMAVTAYQNQLITKLKIEKNPFAKGFRD
Links
Other
T-box
family TFs
Other
Nippostrongylus brasiliensis
TFs
19 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ANCCAN_17994
Ancylostoma caninum
ANCCAN_17994
N
0.773
ANCCAN_19748
Ancylostoma caninum
ANCCAN_19748
N
0.855
ASIM_0001646101
Anisakis simplex
ASIM_0001646101
N
0.824
ASIM_0000148501
Anisakis simplex
ASIM_0000148501
N
0.824
Bm6032
Brugia malayi
Bm6032
N
0.827
BTMF_0001483201
Brugia timori
BTMF_0001483201
N
0.827
DICVIV_06158
Dictyocaulus viviparus
DICVIV_06158
N
0.858
nDi.2.2.2.g09029
Dirofilaria immitis
nDi.2.2.2.g09029
N
0.827
EEL_0000193401
Elaeophora elaphi
EEL_0000193401
N
0.812
EVEC_0000979001
Enterobius vermicularis
EVEC_0000979001
N
0.819
Hba_09879
Heterorhabditis bacteriophora
Hba_09879
N
0.794
nLs.2.1.2.g03773
Litomosoides sigmodontis
nLs.2.1.2.g03773
N
0.824
LOAG_18570
Loa loa
LOAG_18570
N
0.760
OFLC_0000512101
Onchocerca flexuosa
OFLC_0000512101
N
0.821
scaffold432-EXSNAP2012.9
Pristionchus exspectatus
scaffold432-EXSNAP2012.9
N
0.828
PPA25262
Pristionchus pacificus
PPA25262
N
0.844
SMUV_0000328301
Syphacia muris
SMUV_0000328301
N
0.818
TCLT_0000808101
Thelazia callipaeda
TCLT_0000808101
N
0.827
WUBG_08467
Wuchereria bancrofti
WUBG_08467
N
0.821