CBN01059 (Caenorhabditis brenneri)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 CBN01059 T342189_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.832 0.832
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.832 0.832
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.832 0.832
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.832 0.832
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.832 0.832
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.832 0.832
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.832 0.832
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.832 0.832
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.832 0.832
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.832 0.832
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.737 0.737
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.737 0.737
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.737 0.737
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CBN01059 TBP 162 244
CBN01059 TBP 252 335

Links

Other TBP family TFs
Other Caenorhabditis brenneri TFs

746 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI000624 Acyrthosiphon pisum ACYPI000624 I
AAEL004806 Aedes aegypti AAEL004806 I
ENSAMEG00000012407 Ailuropoda melanoleuca ENSAMEG00000012407 I
ENSAMEG00000012525 Ailuropoda melanoleuca ENSAMEG00000012525 I
Alligator_sinensis_CCG013952.1 Alligator sinensis Alligator_sinensis_CCG013952.1 I
ENSAPLG00000004321 Anas platyrhynchos ENSAPLG00000004321 I
ANCDUO_04077 Ancylostoma duodenale ANCDUO_04077 I
ACAC_0001026501 Angiostrongylus cantonensis ACAC_0001026501 I
ACOC_0001313301 Angiostrongylus costaricensis ACOC_0001313301 I
KLF8 Anolis carolinensis ENSACAG00000006389 I
AALB010205 Anopheles albimanus AALB010205 I
AARA000098 Anopheles arabiensis AARA000098 I
AATE020384 Anopheles atroparvus AATE020384 I
ACHR001612 Anopheles christyi ACHR001612 I
ACOM041708 Anopheles coluzzii ACOM041708 I
ACUA022835 Anopheles culicifacies ACUA022835 I
ADAC003701 Anopheles darlingi ADAC003701 I
ADIR011723 Anopheles dirus ADIR011723 I
AFAF003290 Anopheles farauti AFAF003290 I
AFUN011554 Anopheles funestus AFUN011554 I
AGAP010520 Anopheles gambiae AGAP010520 I
AMEM014876 Anopheles merus AMEM014876 I
AMIN001268 Anopheles minimus AMIN001268 I
AQUA001297 Anopheles quadriannulatus AQUA001297 I
ASTEI07110 Anopheles stephensi ASTEI07110 I
Afo_R011492 Aptenodytes forsteri Afo_R011492 I
ENSAMXG00000007099 Astyanax mexicanus ENSAMXG00000007099 I
BGIBMGA002047 Bombyx mori BGIBMGA002047 I
ENSBTAP00000043340-D1 Bos grunniens ENSBTAP00000043340-D1 I
ENSP00000366915-D1 Bos grunniens ENSP00000366915-D1 I
KLF5 Bos taurus ENSBTAG00000002129 I
KLF1 Bos taurus ENSBTAG00000006083 I
Brh_R008564 Buceros rhinoceros Brh_R008564 I
BXY_0235800 Bursaphelenchus xylophilus BXY_0235800 I
KLF1 Callithrix jacchus ENSCJAG00000004762 I
KLF5 Callithrix jacchus ENSCJAG00000021146 I
Aan_R005216 Calypte anna Aan_R005216 I
KLF5 Canis familiaris ENSCAFG00000005037 I
KLF1 Canis familiaris ENSCAFG00000017111 I
CapteG137485 Capitella teleta CapteG137485 I
CapteG163104 Capitella teleta CapteG163104 I
KLF1 Cavia porcellus ENSCPOG00000000784 I
KLF5 Cavia porcellus ENSCPOG00000001346 I
Cmyd_10014847 Chelonia mydas Cmyd_10014847 I
Cmyd_10016058 Chelonia mydas Cmyd_10016058 I
ENSCSAG00000006545 Chlorocebus sabaeus ENSCSAG00000006545 I
ENSCSAG00000017614 Chlorocebus sabaeus ENSCSAG00000017614 I
ENSCHOG00000009798 Choloepus hoffmanni ENSCHOG00000009798 I
zf(c2h2)-23 Ciona intestinalis ENSCING00000014976 I
ENSCSAVG00000002903 Ciona savignyi ENSCSAVG00000002903 I
CGI_10000441 Crassostrea gigas CGI_10000441 I
CGI_10010790 Crassostrea gigas CGI_10010790 I
CpipJ_CPIJ004724 Culex pipiens CpipJ_CPIJ004724 I
CPIJ004724 Culex quinquefasciatus CPIJ004724 I
KGM_08807 Danaus plexippus KGM_08807 I
KGM_10879 Danaus plexippus KGM_10879 I
klf8 Danio rerio ENSDARG00000060661 I
DAPPUDRAFT_243802 Daphnia pulex DAPPUDRAFT_243802 I
DAPPUDRAFT_27999 Daphnia pulex DAPPUDRAFT_27999 I
DAPPUDRAFT_310992 Daphnia pulex DAPPUDRAFT_310992 I
DAPPUDRAFT_48391 Daphnia pulex DAPPUDRAFT_48391 I
DAPPUDRAFT_51551 Daphnia pulex DAPPUDRAFT_51551 I
KLF5 Dasypus novemcinctus ENSDNOG00000034130 I
Klf5 Dipodomys ordii ENSDORG00000005117 I
GF24217 Drosophila ananassae FBgn0101211 I
GG15151 Drosophila erecta FBgn0107404 I
GH16421 Drosophila grimshawi FBgn0123892 I
dar1 Drosophila melanogaster FBgn0263239 D
GI12500 Drosophila mojavensis FBgn0135257 I
GL21001 Drosophila persimilis FBgn0158596 I
GM14583 Drosophila sechellia FBgn0169504 I
GD13775 Drosophila simulans FBgn0185475 I
GJ12406 Drosophila virilis FBgn0199649 I
GK20520 Drosophila willistoni FBgn0222517 I
GE21373 Drosophila yakuba FBgn0238635 I
KLF5 Echinops telfairi ENSETEG00000017048 I
KLF5 Equus caballus ENSECAG00000010546 I
KLF5 Erinaceus europaeus ENSEEUG00000012747 I
KLF1 Felis catus ENSFCAG00000026066 I
KLF5 Felis catus ENSFCAG00000031608 I
ENSFALG00000000969 Ficedula albicollis ENSFALG00000000969 I
ENSFALG00000011267 Ficedula albicollis ENSFALG00000011267 I
KLF5 Gallus gallus ENSGALG00000016927 I
klf1 Gasterosteus aculeatus ENSGACG00000019143 I
Gfo_R011826 Geospiza fortis Gfo_R011826 I
KLF5 Gorilla gorilla ENSGGOG00000003245 I
KLF1 Gorilla gorilla ENSGGOG00000003408 I
HPLM_0000852701 Haemonchus placei HPLM_0000852701 I
HMEL003963 Heliconius melpomene HMEL003963 I
HelroG128168 Helobdella robusta HelroG128168 I
KLF5 Homo sapiens ENSG00000102554 D
KLF1 Homo sapiens ENSG00000105610 D
ENSSTOG00000024009 Ictidomys tridecemlineatus ENSSTOG00000024009 I
ISCW016565 Ixodes scapularis ISCW016565 I
ENSLACG00000016296 Latimeria chalumnae ENSLACG00000016296 I
ENSLOCG00000014956 Lepisosteus oculatus ENSLOCG00000014956 I
LotgiG111402 Lottia gigantea LotgiG111402 I
KLF5 Loxodonta africana ENSLAFG00000002268 I
KLF1 Loxodonta africana ENSLAFG00000016145 I
LCUP013827 Lucilia cuprina LCUP013827 I
ENSMMUP00000014716 Macaca fascicularis ENSMMUP00000014716 I
ENSP00000366915 Macaca fascicularis ENSP00000366915 I
PIBF1 Macaca mulatta ENSMMUG00000002533 I
KLF1 Macaca mulatta ENSMMUG00000011230 I
KLF5 Meleagris gallopavo ENSMGAG00000014948 I
KLF5 Microcebus murinus ENSMICG00000014481 I
KLF1 Microcebus murinus ENSMICG00000016260 I
ENSMODG00000000851 Monodelphis domestica ENSMODG00000000851 I
MDOA012204 Musca domestica MDOA012204 I
ENSMPUG00000004544 Mustela putorius furo ENSMPUG00000004544 I
ENSMPUG00000010229 Mustela putorius furo ENSMPUG00000010229 I
Myotis_brandtii_KLF5_10017339 Myotis brandtii Myotis_brandtii_KLF5_10017339 I
KLF1 Myotis lucifugus ENSMLUG00000012751 I
KLF5 Myotis lucifugus ENSMLUG00000014503 I
NBR_0001426101 Nippostrongylus brasiliensis NBR_0001426101 I
ENSNLEG00000012868 Nomascus leucogenys ENSNLEG00000012868 I
ENSNLEG00000016120 Nomascus leucogenys ENSNLEG00000016120 I
ENSNLEG00000018821 Nomascus leucogenys ENSNLEG00000018821 I
KLF1 Ochotona princeps ENSOPRG00000004951 I
Ocbimv22021283m.g Octopus bimaculoides Ocbimv22021283m.g I
Ogr12039 Ophisaurus gracilis Ogr12039 I
Ogr17508 Ophisaurus gracilis Ogr17508 I
KLF8 Ornithorhynchus anatinus ENSOANG00000001989 I
ENSOANG00000009313 Ornithorhynchus anatinus ENSOANG00000009313 I
KLF5 Oryctolagus cuniculus ENSOCUG00000011318 I
KLF1 Oryctolagus cuniculus ENSOCUG00000011998 I
KLF5 Otolemur garnettii ENSOGAG00000002733 I
KLF1 Otolemur garnettii ENSOGAG00000025438 I
ENSOARG00000015505 Ovis aries ENSOARG00000015505 I
KLF5 Pan troglodytes ENSPTRG00000005928 I
KLF1 Pan troglodytes ENSPTRG00000010547 I
ENSPTRG00000039565 Pan troglodytes ENSPTRG00000039565 I
ENSPANG00000024153 Papio anubis ENSPANG00000024153 I
Pvit_05333 Pogona vitticeps Pvit_05333 I
ENSPPYG00000005415 Pongo abelii ENSPPYG00000005415 I
ENSPPYG00000009612 Pongo abelii ENSPPYG00000009612 I
KLF5 Procavia capensis ENSPCAG00000007806 I
KLF1 Procavia capensis ENSPCAG00000015589 I
SBAD_0000267001 Soboliphyme baturini SBAD_0000267001 I
SMAR008306 Strigamia maritima SMAR008306 I
ENSSSCG00000009462 Sus scrofa ENSSSCG00000009462 I
KLF1 Sus scrofa ENSSSCG00000013730 I
ENSTGUG00000005539 Taeniopygia guttata ENSTGUG00000005539 I
ENSTGUG00000006403 Taeniopygia guttata ENSTGUG00000006403 I
ENSTRUG00000007828 Takifugu rubripes ENSTRUG00000007828 I
klf5b Takifugu rubripes ENSTRUG00000011253 I
tetur02g04760 Tetranychus urticae tetur02g04760 I
klf5b Tetraodon nigroviridis ENSTNIG00000014985 I
TCLT_0000033501 Thelazia callipaeda TCLT_0000033501 I
EFV55190 Trichinella spiralis EFV55190 I
EFV55215 Trichinella spiralis EFV55215 I
D918_01816 Trichuris suis D918_01816 I
D918_06264 Trichuris suis D918_06264 I
TTRE_0000268201 Trichuris trichiura TTRE_0000268201 I
KLF5 Tupaia belangeri ENSTBEG00000008688 I
KLF1 Tupaia belangeri ENSTBEG00000013433 I
KLF1 Tursiops truncatus ENSTTRG00000003596 I
KLF5 Tursiops truncatus ENSTTRG00000004269 I
KLF5 Vicugna pacos ENSVPAG00000003590 I
klf5 Xenopus tropicalis XB-GENE-490587 I
klf3 Xenopus tropicalis XB-GENE-961742 I
ENSXMAG00000011010 Xiphophorus maculatus ENSXMAG00000011010 I
L798_11558 Zootermopsis nevadensis L798_11558 I
L798_11559 Zootermopsis nevadensis L798_11559 I
L798_11563 Zootermopsis nevadensis L798_11563 I