TBPL2 (Choloepus hoffmanni)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 ENSCHOG00000011134 T342282_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.753 0.753
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.753 0.753
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.753 0.753
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.753 0.753
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.753 0.753
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.753 0.753
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.753 0.753
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.753 0.753
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.753 0.753
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.753 0.753
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCHOP00000009849 TBP 144 214
ENSCHOP00000009849 TBP 294 317

Links

Other TBP family TFs
Other Choloepus hoffmanni TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010603 Ailuropoda melanoleuca ENSAMEG00000010603 N 0.753
ENSAPLG00000006951 Anas platyrhynchos ENSAPLG00000006951 I 0.765
ENSACAG00000000993 Anolis carolinensis ENSACAG00000000993 N 0.718
AMEC012048 Anopheles melas AMEC012048 N 0.718
GB47180 Apis mellifera GB47180 I 0.753
ACEP14716 Atta cephalotes ACEP14716 I 0.765
fgenesh2_pg.scaffold_68000071 Branchiostoma floridae fgenesh2_pg.scaffold_68000071 N 0.718
Cflo_04179--XP_623088.1_APIME Camponotus floridanus Cflo_04179--XP_623088.1_APIME I 0.765
TBPL2 Cavia porcellus ENSCPOG00000006151 I 0.800
CLEC006116 Cimex lectularius CLEC006116 N 0.706
KGM_04261 Danaus plexippus KGM_04261 I 0.753
GI18943 Drosophila mojavensis FBgn0141682 I 0.741
ENSECAG00000008702 Equus caballus ENSECAG00000008702 I 0.718
TBPL2 Erinaceus europaeus ENSEEUG00000008616 I 0.741
TBPL2 Gallus gallus ENSGALG00000012145 I 0.776
TBPL2 Gorilla gorilla ENSGGOG00000001055 I 0.753
HMEL016424 Heliconius melpomene HMEL016424 I 0.753
TBPL2 Meleagris gallopavo ENSMGAG00000013657 I 0.776
MCINX007129 Melitaea cinxia MCINX007129 I 0.753
SBAD_0001092401 Soboliphyme baturini SBAD_0001092401 N 0.718
L596_g25394 Steinernema carpocapsae L596_g25394 I 0.706
TriadG50358 Trichoplax adhaerens TriadG50358 I 0.706