HMPREF1541_03377 (Cyphellophora europaea)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 HMPREF1541_03377 T342628_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.910 0.910
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.910 0.910
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.910 0.910
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.820 0.820
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.820 0.820
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.820 0.820
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.820 0.820
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.820 0.820
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.820 0.820
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.820 0.820
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.820 0.820
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.820 0.820
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.820 0.820
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ETN41441 TBP 80 162
ETN41441 TBP 170 253

Links

Other TBP family TFs
Other Cyphellophora europaea TFs

765 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aquca_028_00182 Aquilegia coerulea Aquca_028_00182 N
Bo9g003750 Brassica oleracea Bo9g003750 N
Bra037388 Brassica rapa Bra037388 N
Ciclev10006315m.g Citrus clementina Ciclev10006315m.g N
Eucgr.E00851 Eucalyptus grandis Eucgr.E00851 N
LPERR01G19720 Leersia perrieri LPERR01G19720 N
LPERR01G19750 Leersia perrieri LPERR01G19750 N
Lus10005949.g Linum usitatissimum Lus10005949.g N
OBART01G22950 Oryza barthii OBART01G22950 N
OBART01G22980 Oryza barthii OBART01G22980 N
OB01G32460 Oryza brachyantha OB01G32460 N
OB01G32480 Oryza brachyantha OB01G32480 N
ORGLA01G0184700 Oryza glaberrima ORGLA01G0184700 N
OGLUM01G26700 Oryza glumaepatula OGLUM01G26700 N
OGLUM01G26760 Oryza glumaepatula OGLUM01G26760 N
BGIOSGA001193 Oryza indica BGIOSGA001193 N
BGIOSGA001192 Oryza indica BGIOSGA001192 N
OLONG_010128 Oryza longistaminata OLONG_010128 N
OMERI01G21040 Oryza meridionalis OMERI01G21040 N
OPUNC01G23150 Oryza punctata OPUNC01G23150 N
ORUFI01G25760 Oryza rufipogon ORUFI01G25760 N
ORUFI01G25800 Oryza rufipogon ORUFI01G25800 N
Pavir.J30777 Panicum virgatum Pavir.J30777 N
Pavir.Eb02165 Panicum virgatum Pavir.Eb02165 N
POPTR_0012s01420 Populus trichocarpa POPTR_0012s01420 N
POPTR_0015s02310 Populus trichocarpa POPTR_0015s02310 N
SapurV1A.0013s0580 Salix purpurea SapurV1A.0013s0580 N
Sb03g028170 Sorghum bicolor Sb03g028170 N
TCM_015351 Theobroma cacao TCM_015351 N
Traes_3DL_30CF35BB3 Triticum aestivum Traes_3DL_30CF35BB3 N
TRAES3BF020200120CFD_g Triticum aestivum TRAES3BF020200120CFD_g N
TRIUR3_10842 Triticum urartu TRIUR3_10842 N
GRMZM2G057955 Zea mays GRMZM2G057955 N