MLOC_37365 (Hordeum vulgare)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 MLOC_37365 T342715_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.882 0.882
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.882 0.882
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.859 0.859
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.834 0.834
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.819 0.819
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.819 0.819
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.819 0.819
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.819 0.819
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.819 0.819
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.819 0.819
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.819 0.819
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.819 0.819
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.819 0.819
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MLOC_37365.1 TBP 1 43
MLOC_37365.1 TBP 51 134
MLOC_37365.2 TBP 1 43
MLOC_37365.2 TBP 51 134
MLOC_37365.3 TBP 28 106
MLOC_37365.3 TBP 114 197
MLOC_37365.4 TBP 28 106
MLOC_37365.4 TBP 114 197

Links

Other TBP family TFs
Other Hordeum vulgare TFs

789 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG012514.1 Alligator sinensis Alligator_sinensis_CCG012514.1 N
ENSAPLG00000010091 Anas platyrhynchos ENSAPLG00000010091 N
ASCL4 Anolis carolinensis ENSACAG00000014904 N
Afo_R011068 Aptenodytes forsteri Afo_R011068 N
ENSAMXG00000025834 Astyanax mexicanus ENSAMXG00000025834 N
ENSP00000345420-D1 Bos grunniens ENSP00000345420-D1 N
ASCL4 Bos taurus ENSBTAG00000046402 N
Brh_R008738 Buceros rhinoceros Brh_R008738 N
Aan_R008653 Calypte anna Aan_R008653 N
ASCL4 Canis familiaris ENSCAFG00000029147 N
CapteG80670 Capitella teleta CapteG80670 N
Cmyd_10007197 Chelonia mydas Cmyd_10007197 N
ENSCSAG00000018942 Chlorocebus sabaeus ENSCSAG00000018942 N
ASCL4 Dasypus novemcinctus ENSDNOG00000012573 N
ASCL4 Erinaceus europaeus ENSEEUG00000010344 N
ENSFALG00000013339 Ficedula albicollis ENSFALG00000013339 N
ASCL4 Gallus gallus ENSGALG00000019304 N
Gfo_R004637 Geospiza fortis Gfo_R004637 N
ASCL4 Gorilla gorilla ENSGGOG00000025905 N
ASCL4 Homo sapiens ENSG00000187855 N
ASCL4 Loxodonta africana ENSLAFG00000004655 N
ENSP00000345420 Macaca fascicularis ENSP00000345420 N
ENSMMUG00000015552 Macaca mulatta ENSMMUG00000015552 N
ASCL4 Meleagris gallopavo ENSMGAG00000012814 N
ASCL4 Ochotona princeps ENSOPRG00000003533 N
Ogr16121 Ophisaurus gracilis Ogr16121 N
ASCL4 Otolemur garnettii ENSOGAG00000024863 N
ASCL4 Pan troglodytes ENSPTRG00000005401 N
ENSPANG00000003357 Papio anubis ENSPANG00000003357 N
ENSPSIG00000011827 Pelodiscus sinensis ENSPSIG00000011827 N
Pvit_09755 Pogona vitticeps Pvit_09755 N
ASCL4 Procavia capensis ENSPCAG00000012491 N
ASCL4 Pteropus vampyrus ENSPVAG00000001597 N
Sakowv30004611m.g Saccoglossus kowalevskii Sakowv30004611m.g N
ASCL4 Sorex araneus ENSSARG00000004843 N
ASCL4 Sus scrofa ENSSSCG00000000159 N
ASCL4 Taeniopygia guttata ENSTGUG00000010960 N
ASCL4 Tursiops truncatus ENSTTRG00000011068 N
Tal_R012347 Tyto alba Tal_R012347 N
XP_002940370 Xenopus tropicalis XP_002940370 N