Si039719m.g (Setaria italica)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00352 (TBP) IPR000814 Si039719m.g T342890_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.796 0.796
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.796 0.796
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.796 0.796
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.796 0.796
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.796 0.796
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.796 0.796
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.796 0.796
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.796 0.796
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.796 0.796
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.796 0.796
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.778 0.778
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.778 0.778
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.778 0.778
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Si039719m TBP 51 133
Si039719m TBP 141 224

Links

Other TBP family TFs
Other Setaria italica TFs

758 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZBTB45 Canis familiaris ENSCAFG00000002356 I
ZBTB45 Cavia porcellus ENSCPOG00000021221 I
ENSCSAG00000001591 Chlorocebus sabaeus ENSCSAG00000001591 I
ZBTB45 Dasypus novemcinctus ENSDNOG00000049612 I
ENSDORG00000008916 Dipodomys ordii ENSDORG00000008916 I
ZBTB45 Equus caballus ENSECAG00000010390 I
ZBTB45 Felis catus ENSFCAG00000024270 I
ZBTB45 Homo sapiens ENSG00000119574 D
ENSSTOG00000004240 Ictidomys tridecemlineatus ENSSTOG00000004240 I
ZBTB45 Loxodonta africana ENSLAFG00000032480 I
ZBTB45 Macaca mulatta ENSMMUG00000017874 I
ENSMPUG00000008283 Mustela putorius furo ENSMPUG00000008283 I
Zbtb45 Mus musculus ENSMUSG00000049600 I
ENSNLEG00000011187 Nomascus leucogenys ENSNLEG00000011187 I
ENSOPRG00000017040 Ochotona princeps ENSOPRG00000017040 I
ZBTB45 Oryctolagus cuniculus ENSOCUG00000013828 I
ZBTB45 Otolemur garnettii ENSOGAG00000034747 I
ENSOARG00000003909 Ovis aries ENSOARG00000003909 I
ZBTB45 Pan troglodytes ENSPTRG00000011597 I
ENSPANG00000010839 Papio anubis ENSPANG00000010839 I
ENSPPYG00000010509 Pongo abelii ENSPPYG00000010509 I
ZBTB45 Pteropus vampyrus ENSPVAG00000013975 I
Zbtb45 Rattus norvegicus ENSRNOG00000027459 I
ZBTB45 Sorex araneus ENSSARG00000001558 I
ZBTB45 Tursiops truncatus ENSTTRG00000001996 I