ABW98303.1 (Hemiselmis andersenii)
TBP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00352 (TBP) IPR000814 ABW98303.1 T343195_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SPT15
M01567_2.00 		Saccharomyces cerevisiae
NNDWDAW
WTHWHNN		 PBM
Zhu et al.(2009)
Spt15 		0.747 0.747
SPT15
M08609_2.00 		Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN		 Misc
DeBoer et al.(2011)
YER148W_798 		0.747 0.747
SPT15
M11393_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$TBP_Q6 		0.747 0.747
Tbp
M00216_2.00 		Mus musculus
NWWWWAW
WTWWWWN		 PBM
Badis et al.(2009)
Tbp_pr781 		0.741 0.741
TBP
M08231_2.00 		Homo sapiens
YATTTGCATD
HATGCAAATR		 ChIP-seq
Contrino et al.(2012)
Mv129 		0.741 0.741
TBP
M09432_2.00 		Homo sapiens
MTATAWAWRS
SYWTWTATAK		 Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A 		0.741 0.741
Tbp
M09433_2.00 		Mus musculus
VTATAAAARS
SYTTTTATAB		 Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A 		0.741 0.741
TBP
M11388_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Transfac
Matys et al.(2006)
V$TATA_01 		0.741 0.741
TBP
M11389_2.00 		Homo sapiens
NCYWTAAAAD
HTTTTAWRGN		 Transfac
Matys et al.(2006)
V$TATA_C 		0.741 0.741
TBP
M11390_2.00 		Homo sapiens
KATAAATW
WATTTATM		 Transfac
Matys et al.(2006)
V$TBP_01 		0.741 0.741
TBP
M11391_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6_01 		0.741 0.741
TBP
M11392_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$TBP_Q6 		0.741 0.741
TBP
M11491_2.00 		Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB		 Unknown
Mathelier et al.(2014)
MA0108.2 		0.741 0.741
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ABW98303.1 TBP 91 172
ABW98303.1 TBP 181 264

Links

Other TBP family TFs
Other Hemiselmis andersenii TFs

700 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M437DRAFT_58247 Aureobasidium melanogenum M437DRAFT_58247 N
M438DRAFT_341722 Aureobasidium pullulans M438DRAFT_341722 N
AUEXF2481DRAFT_35357 Aureobasidium subglaciale AUEXF2481DRAFT_35357 N
BAUCODRAFT_71053 Baudoinia compniacensis BAUCODRAFT_71053 N
COCC4DRAFT_198330 Bipolaris maydis COCC4DRAFT_198330 N
COCMIDRAFT_31558 Bipolaris oryzae COCMIDRAFT_31558 N
COCSADRAFT_298423 Bipolaris sorokiniana COCSADRAFT_298423 N
COCVIDRAFT_42182 Bipolaris victoriae COCVIDRAFT_42182 N
COCCADRAFT_40248 Bipolaris zeicola COCCADRAFT_40248 N
Bcin02g05110 Botrytis cinerea Bcin02g05110 N
PVAR5_1909 Byssochlamys spectabilis PVAR5_1909 N
A1O1_06094 Capronia coronata A1O1_06094 N
A1O3_05625 Capronia epimyces A1O3_05625 N
PV04_05609 Capronia semiimmersa PV04_05609 N
Z519_10549 Cladophialophora bantiana Z519_10549 N
G647_02028 Cladophialophora carrionii G647_02028 N
PV07_08163 Cladophialophora immunda PV07_08163 N
A1O5_09655 Cladophialophora psammophila A1O5_09655 N
A1O7_03735 Cladophialophora yegresii A1O7_03735 N
W97_04778 Coniosporium apollinis W97_04778 N
HMPREF1541_01554 Cyphellophora europaea HMPREF1541_01554 N
DOTSEDRAFT_73264 Dothistroma septosporum DOTSEDRAFT_73264 N
EPUS_07060 Endocarpon pusillum EPUS_07060 N
A1O9_00579 Exophiala aquamarina A1O9_00579 N
HMPREF1120_03931 Exophiala dermatitidis HMPREF1120_03931 N
PV10_00661 Exophiala mesophila PV10_00661 N
PV06_04914 Exophiala oligosperma PV06_04914 N
PV11_05067 Exophiala sideris PV11_05067 N
PV08_10923 Exophiala spinifera PV08_10923 N
PV05_06830 Exophiala xenobiotica PV05_06830 N
Z517_11562 Fonsecaea pedrosoi Z517_11562 N
LEMA_P007270.1 Leptosphaeria maculans LEMA_P007270.1 N
MBM_03061 Marssonina brunnea MBM_03061 N
estExt_Genewise1Plus.C_120201 Mycosphaerella fijiensis estExt_Genewise1Plus.C_120201 N
e_gw1.6.106.1 Mycosphaerella graminicola e_gw1.6.106.1 N
UCRNP2_7309 Neofusicoccum parvum UCRNP2_7309 N
OIDMADRAFT_168714 Oidiodendron maius OIDMADRAFT_168714 N
SNOG_03309 Phaeosphaeria nodorum SNOG_03309 N
MYCFIDRAFT_139431 Pseudocercospora fijiensis MYCFIDRAFT_139431 N
GMDG_05496 Pseudogymnoascus destructans GMDG_05496 N
V499_07479 Pseudogymnoascus pannorum V499_07479 N
PTT_14853 Pyrenophora teres PTT_14853 N
PTRG_11568 Pyrenophora triticirepentis PTRG_11568 N
Z518_04782 Rhinocladiella mackenziei Z518_04782 N
SBOR_1756 Sclerotinia borealis SBOR_1756 N
SS1G_11145 Sclerotinia sclerotiorum SS1G_11145 N
SEPMUDRAFT_149101 Sphaerulina musiva SEPMUDRAFT_149101 N
SNOG_03308 Stagonospora nodorum SNOG_03308 N
Mycgr3G43295 Zymoseptoria tritici Mycgr3G43295 N