CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AALB006989
(
Anopheles albimanus
)
TBP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00352 (TBP)
IPR000814
AALB006989
T343313_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Tbp
M00216_2.00
Mus musculus
NWWWWAW
WTWWWWN
PBM
Badis et al.(2009)
Tbp_pr781
0.916
0.916
TBP
M08231_2.00
Homo sapiens
YATTTGCATD
HATGCAAATR
ChIP-seq
Contrino et al.(2012)
Mv129
0.916
0.916
TBP
M09432_2.00
Homo sapiens
MTATAWAWRS
SYWTWTATAK
Misc
Kulakovskiy et al.(2013)
TBP_HUMAN.H11MO.0.A
0.916
0.916
Tbp
M09433_2.00
Mus musculus
VTATAAAARS
SYTTTTATAB
Misc
Kulakovskiy et al.(2013)
TBP_MOUSE.H11MO.0.A
0.916
0.916
TBP
M11388_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Transfac
Matys et al.(2006)
V$TATA_01
0.916
0.916
TBP
M11389_2.00
Homo sapiens
NCYWTAAAAD
HTTTTAWRGN
Transfac
Matys et al.(2006)
V$TATA_C
0.916
0.916
TBP
M11390_2.00
Homo sapiens
KATAAATW
WATTTATM
Transfac
Matys et al.(2006)
V$TBP_01
0.916
0.916
TBP
M11391_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6_01
0.916
0.916
TBP
M11392_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TBP_Q6
0.916
0.916
TBP
M11491_2.00
Homo sapiens
VTATAWAWRVVNNNN
NNNNBBYWTWTATAB
Unknown
Mathelier et al.(2014)
MA0108.2
0.916
0.916
SPT15
M01567_2.00
Saccharomyces cerevisiae
NNDWDAW
WTHWHNN
PBM
Zhu et al.(2009)
Spt15
0.819
0.819
SPT15
M08609_2.00
Saccharomyces cerevisiae
NNBBHWTATATATWNCNNDNB
VNHNNGNWATATATAWDVVNN
Misc
DeBoer et al.(2011)
YER148W_798
0.819
0.819
SPT15
M11393_2.00
Saccharomyces cerevisiae
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
F$TBP_Q6
0.819
0.819
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AALB006989-PA
TBP
730
811
PQLQNIVSTVNLSCKLDLKKIALHARNAEYNPKRFAAVIMRIREPRTTALIFSSGKMVCTGAKSEEDSRLAARKYARIIQKL
AALB006989-PA
TBP
819
902
DFKVQNMVGSCDVRFPIRLEGLVLTHGRFSSYEPELFPGLIYRMVKPRIVLLIFVSGKVVLTGAKVRQEIYDAFENIYPILKSF
Links
Other
TBP
family TFs
Other
Anopheles albimanus
TFs
768 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF7
Canis familiaris
ENSCAFG00000030492
I
ZNF7
Cavia porcellus
ENSCPOG00000010429
I
ZNF7
Choloepus hoffmanni
ENSCHOG00000001749
N
ZNF7
Dasypus novemcinctus
ENSDNOG00000043881
I
Zfp7
Dipodomys ordii
ENSDORG00000011889
I
ZNF7
Gorilla gorilla
ENSGGOG00000008185
I
ZNF7
Homo sapiens
ENSG00000147789
D
ENSSTOG00000021142
Ictidomys tridecemlineatus
ENSSTOG00000021142
I
ZNF7
Loxodonta africana
ENSLAFG00000010535
I
ENSMPUG00000006051
Mustela putorius furo
ENSMPUG00000006051
I
Myotis_brandtii_ZNF7_10006486
Myotis brandtii
Myotis_brandtii_ZNF7_10006486
I
ZNF7
Myotis lucifugus
ENSMLUG00000016510
I
ZNF7
Oryctolagus cuniculus
ENSOCUG00000022081
I
ZNF7
Pan troglodytes
ENSPTRG00000020717
I
ENSPPYG00000018994
Pongo abelii
ENSPPYG00000018994
I
ZNF7
Pteropus vampyrus
ENSPVAG00000004291
I
Znf7
Rattus norvegicus
ENSRNOG00000050497
I
LOC108348145
Rattus norvegicus
ENSRNOG00000050695
I
ZNF7
Sorex araneus
ENSSARG00000013435
I