AMTR_s00021p00158020 (Amborella trichopoda)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 AMTR_s00021p00158020 T343665_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.959 0.609
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.958 0.609
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.950 0.545
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.950 0.545
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.950 0.545
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.942 0.564
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.898 0.455
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.889 0.427
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.889 0.427
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.883 0.427
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.865 0.400
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.853 0.418
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.850 0.427
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.850 0.427
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ERN13972 TCP 25 206

Links

Other TCP family TFs
Other Amborella trichopoda TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI001312 Acyrthosiphon pisum ACYPI001312 N
ACYPI004047 Acyrthosiphon pisum ACYPI004047 N
AAEL003968 Aedes aegypti AAEL003968 N
Aqu1.227716 Amphimedon queenslandica Aqu1.227716 N
AALB008486 Anopheles albimanus AALB008486 N
AARA009005 Anopheles arabiensis AARA009005 N
AATE001469 Anopheles atroparvus AATE001469 N
ACHR004577 Anopheles christyi ACHR004577 N
ACOM027442 Anopheles coluzzii ACOM027442 N
ADAC000396 Anopheles darlingi ADAC000396 N
ADIR009502 Anopheles dirus ADIR009502 N
AEPI007981 Anopheles epiroticus AEPI007981 N
AFAF015825 Anopheles farauti AFAF015825 N
AGAP010700 Anopheles gambiae AGAP010700 N
AMAM002480 Anopheles maculatus AMAM002480 N
AMEC018533 Anopheles melas AMEC018533 N
AMEM011057 Anopheles merus AMEM011057 N
AMIN008662 Anopheles minimus AMIN008662 N
AQUA002391 Anopheles quadriannulatus AQUA002391 N
GB49325 Apis mellifera GB49325 N
ENSAMXG00000005709 Astyanax mexicanus ENSAMXG00000005709 N
BGIBMGA000930 Bombyx mori BGIBMGA000930 N
Brh_R002088 Buceros rhinoceros Brh_R002088 N
Cflo_07758--XP_396195.2_APIME Camponotus floridanus Cflo_07758--XP_396195.2_APIME N
Cmyd_10005769 Chelonia mydas Cmyd_10005769 N
CLEC009664 Cimex lectularius CLEC009664 N
CpipJ_CPIJ011038 Culex pipiens CpipJ_CPIJ011038 N
CPIJ011038 Culex quinquefasciatus CPIJ011038 N
KGM_18078 Danaus plexippus KGM_18078 N
ENSEEUG00000014927 Erinaceus europaeus ENSEEUG00000014927 N
ENSGGOG00000012841 Gorilla gorilla ENSGGOG00000012841 N
HHAL007873-PA Halyomorpha halys HHAL007873-PA N
HHAL009893-PA Halyomorpha halys HHAL009893-PA N
Hsal_10566--XP_396195.2_APIME Harpegnathos saltator Hsal_10566--XP_396195.2_APIME N
XP_002163131.1 Hydra magnipapillata XP_002163131.1 N
LLOJ000827 Lutzomyia longipalpis LLOJ000827 N
MCINX005268 Melitaea cinxia MCINX005268 N
NV15374 Nasonia vitripennis NV15374 N
NEMVEDRAFT_v1g226879 Nematostella vectensis NEMVEDRAFT_v1g226879 N
PPAI003395 Phlebotomus papatasi PPAI003395 N
PPA02259 Pristionchus pacificus PPA02259 N
SMARCA1 Pteropus vampyrus ENSPVAG00000003805 N
RPRC004446 Rhodnius prolixus RPRC004446 N
SINV15598 Solenopsis invicta SINV15598 N
SMAR014171 Strigamia maritima SMAR014171 N
ENSTGUG00000015201 Taeniopygia guttata ENSTGUG00000015201 N
ENSTSYG00000004240 Tarsius syrichta ENSTSYG00000004240 N
ENSVPAG00000010492 Vicugna pacos ENSVPAG00000010492 N
L798_15354 Zootermopsis nevadensis L798_15354 N