BGIOSGA025162 (Oryza indica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BGIOSGA025162 T343712_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.953 0.290
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.953 0.290
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.953 0.290
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.952 0.285
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA025162-PA TCP 59 199
BGIOSGA025162-PA TCP 317 410

Links

Other TCP family TFs
Other Oryza indica TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
M378DRAFT_75687 Amanita muscaria M378DRAFT_75687 N
CERSUDRAFT_137619 Ceriporiopsis subvermispora CERSUDRAFT_137619 N
CC1G_09834 Coprinopsis cinerea CC1G_09834 N
DICSQDRAFT_64693 Dichomitus squalens DICSQDRAFT_64693 N
FIBRA_07605 Fibroporia radiculosa FIBRA_07605 N
FOMPIDRAFT_1116385 Fomitopsis pinicola FOMPIDRAFT_1116385 N
GALMADRAFT_246384 Galerina marginata GALMADRAFT_246384 N
GLOTRDRAFT_65551 Gloeophyllum trabeum GLOTRDRAFT_65551 N
GYMLUDRAFT_50070 Gymnopus luxurians GYMLUDRAFT_50070 N
M413DRAFT_18957 Hebeloma cylindrosporum M413DRAFT_18957 N
HETIRDRAFT_479833 Heterobasidion irregulare HETIRDRAFT_479833 N
HYDPIDRAFT_99795 Hydnomerulius pinastri HYDPIDRAFT_99795 N
JAAARDRAFT_38766 Jaapia argillacea JAAARDRAFT_38766 N
K443DRAFT_129361 Laccaria amethystina K443DRAFT_129361 N
Moror_4655 Moniliophthora roreri Moror_4655 N
PAXRUDRAFT_144589 Paxillus rubicundulus PAXRUDRAFT_144589 N
PHACADRAFT_254069 Phanerochaete carnosa PHACADRAFT_254069 N
fgenesh1_pg.C_scaffold_5000072 Phanerochaete chrysosporium fgenesh1_pg.C_scaffold_5000072 N
PHLGIDRAFT_78080 Phlebiopsis gigantea PHLGIDRAFT_78080 N
PILCRDRAFT_810475 Piloderma croceum PILCRDRAFT_810475 N
PISMIDRAFT_672167 Pisolithus microcarpus PISMIDRAFT_672167 N
M404DRAFT_15942 Pisolithus tinctorius M404DRAFT_15942 N
PLEOSDRAFT_1073145 Pleurotus ostreatus PLEOSDRAFT_1073145 N
POSPLDRAFT_100778 Postia placenta POSPLDRAFT_100778 N
SCHCODRAFT_257495 Schizophyllum commune SCHCODRAFT_257495 N
SCLCIDRAFT_114536 Scleroderma citrinum SCLCIDRAFT_114536 N
M408DRAFT_28343 Serendipita vermifera M408DRAFT_28343 N
SERLA73DRAFT_117697 Serpula lacrymans SERLA73DRAFT_117697 N
CY34DRAFT_772225 Suillus luteus CY34DRAFT_772225 N