BRADI1G58450 (Brachypodium distachyon)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 BRADI1G58450 T343803_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.927 0.446
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.923 0.414
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.923 0.414
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.915 0.395
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.914 0.357
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.914 0.357
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.904 0.338
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.904 0.338
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.904 0.338
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.876 0.306
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.873 0.306
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.866 0.312
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.866 0.312
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.864 0.312
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI1G58450.1 TCP 63 251

Links

Other TCP family TFs
Other Brachypodium distachyon TFs

435 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_514650 Trichomonas vaginalis TVAG_514650 N
TVAG_345660 Trichomonas vaginalis TVAG_345660 N
TVAG_345950 Trichomonas vaginalis TVAG_345950 N
TVAG_353570 Trichomonas vaginalis TVAG_353570 N
TVAG_357040 Trichomonas vaginalis TVAG_357040 N
TVAG_372820 Trichomonas vaginalis TVAG_372820 N
TVAG_384790 Trichomonas vaginalis TVAG_384790 N
TVAG_388950 Trichomonas vaginalis TVAG_388950 N
TVAG_439560 Trichomonas vaginalis TVAG_439560 N
TVAG_453000 Trichomonas vaginalis TVAG_453000 N
TVAG_488790 Trichomonas vaginalis TVAG_488790 N
TVAG_504700 Trichomonas vaginalis TVAG_504700 N
TVAG_506740 Trichomonas vaginalis TVAG_506740 N
TVAG_509250 Trichomonas vaginalis TVAG_509250 N
TVAG_323180 Trichomonas vaginalis TVAG_323180 N
TVAG_515220 Trichomonas vaginalis TVAG_515220 N
TVAG_520250 Trichomonas vaginalis TVAG_520250 N
TVAG_528340 Trichomonas vaginalis TVAG_528340 N
TVAG_546680 Trichomonas vaginalis TVAG_546680 N
TVAG_547380 Trichomonas vaginalis TVAG_547380 I
TVAG_550490 Trichomonas vaginalis TVAG_550490 N
TVAG_552020 Trichomonas vaginalis TVAG_552020 N
TVAG_574310 Trichomonas vaginalis TVAG_574310 N
TVAG_574820 Trichomonas vaginalis TVAG_574820 N
TVAG_579060 Trichomonas vaginalis TVAG_579060 N
TVAG_581440 Trichomonas vaginalis TVAG_581440 N
TVAG_582290 Trichomonas vaginalis TVAG_582290 N
TVAG_582310 Trichomonas vaginalis TVAG_582310 N
TVAG_164960 Trichomonas vaginalis TVAG_164960 N
TVAG_009130 Trichomonas vaginalis TVAG_009130 N
TVAG_029800 Trichomonas vaginalis TVAG_029800 N
TVAG_072940 Trichomonas vaginalis TVAG_072940 N
TVAG_114620 Trichomonas vaginalis TVAG_114620 N
TVAG_125240 Trichomonas vaginalis TVAG_125240 N
TVAG_129110 Trichomonas vaginalis TVAG_129110 N
TVAG_129120 Trichomonas vaginalis TVAG_129120 N
TVAG_132500 Trichomonas vaginalis TVAG_132500 N
TVAG_132770 Trichomonas vaginalis TVAG_132770 N
TVAG_159700 Trichomonas vaginalis TVAG_159700 N
TVAG_160450 Trichomonas vaginalis TVAG_160450 N
TVAG_161450 Trichomonas vaginalis TVAG_161450 N
TVAG_164060 Trichomonas vaginalis TVAG_164060 N
TVAG_007350 Trichomonas vaginalis TVAG_007350 N
TVAG_204520 Trichomonas vaginalis TVAG_204520 N
TVAG_205770 Trichomonas vaginalis TVAG_205770 N
TVAG_208350 Trichomonas vaginalis TVAG_208350 N
TVAG_232930 Trichomonas vaginalis TVAG_232930 N
TVAG_262670 Trichomonas vaginalis TVAG_262670 N
TVAG_282400 Trichomonas vaginalis TVAG_282400 N
TVAG_286640 Trichomonas vaginalis TVAG_286640 N
TVAG_290290 Trichomonas vaginalis TVAG_290290 N
TVAG_298590 Trichomonas vaginalis TVAG_298590 N
TVAG_298740 Trichomonas vaginalis TVAG_298740 N
TVAG_301700 Trichomonas vaginalis TVAG_301700 N
TVAG_313920 Trichomonas vaginalis TVAG_313920 N