TCP24 (Arabidopsis lyrata)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 fgenesh2_kg.1__3195__AT1G30210.2 T343836_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02506_2.00		 Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.981 0.926
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.981 0.926
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.981 0.926
For this family, TFs with SR scores > 0.822 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M02506_2.00 TCP 48 144
M02506_2.00 TCP 111 165

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh2_kg.1__3195__AT1G30210.2 TCP 48 144
fgenesh2_kg.1__3195__AT1G30210.2 TCP 111 165

Links

Other TCP family TFs
Other Arabidopsis lyrata TFs

32 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019088 Ailuropoda melanoleuca ENSAMEG00000019088 N
Alligator_sinensis_CCG017539.1 Alligator sinensis Alligator_sinensis_CCG017539.1 N
ENSAPLG00000001368 Anas platyrhynchos ENSAPLG00000001368 N
ZHX2 Anolis carolinensis ENSACAG00000009402 N
ENSP00000314709-D1 Bos grunniens ENSP00000314709-D1 N
ZHX2 Bos taurus ENSBTAG00000026309 N
ZHX2 Callithrix jacchus ENSCJAG00000022247 N
ZHX2 Canis familiaris ENSCAFG00000000967 N
ZHX2 Cavia porcellus ENSCPOG00000011867 N
Cmyd_10007212 Chelonia mydas Cmyd_10007212 N
ENSCSAG00000018613 Chlorocebus sabaeus ENSCSAG00000018613 N
ZHX2 Dasypus novemcinctus ENSDNOG00000018935 N
Zhx2 Dipodomys ordii ENSDORG00000014490 N
ZHX2 Equus caballus ENSECAG00000023125 N
ZHX2 Erinaceus europaeus ENSEEUG00000003152 N
ZHX2 Felis catus ENSFCAG00000026338 N
ENSFALG00000014375 Ficedula albicollis ENSFALG00000014375 N
ENSGALG00000016390 Gallus gallus ENSGALG00000016390 N
ZHX2 Gorilla gorilla ENSGGOG00000006502 N
ZHX2 Homo sapiens ENSG00000178764 N
ENSSTOG00000011248 Ictidomys tridecemlineatus ENSSTOG00000011248 N
ENSLACG00000007239 Latimeria chalumnae ENSLACG00000007239 N
ZHX2 Loxodonta africana ENSLAFG00000009019 N
ENSP00000314709 Macaca fascicularis ENSP00000314709 N
ZHX2 Macaca mulatta ENSMMUG00000005363 N
ZHX2 Meleagris gallopavo ENSMGAG00000015867 N
Zhx2 Mus musculus ENSMUSG00000071757 N
Myotis_brandtii_ZHX2_10013265 Myotis brandtii Myotis_brandtii_ZHX2_10013265 N
ZHX2 Myotis lucifugus ENSMLUG00000009074 N
ENSNLEG00000005201 Nomascus leucogenys ENSNLEG00000005201 N
ZHX2 Ochotona princeps ENSOPRG00000005053 N
Ogr14963 Ophisaurus gracilis Ogr14963 N
ZHX2 Oryctolagus cuniculus ENSOCUG00000008550 N
ZHX2 Otolemur garnettii ENSOGAG00000026824 N
ZHX2 Pan troglodytes ENSPTRG00000020545 N
ENSPANG00000002729 Papio anubis ENSPANG00000002729 N
ENSPSIG00000007720 Pelodiscus sinensis ENSPSIG00000007720 N
Pvit_18224 Pogona vitticeps Pvit_18224 N
ZHX2 Pteropus vampyrus ENSPVAG00000003962 N
Zhx2 Rattus norvegicus ENSRNOG00000005417 N
ENSSHAG00000011260 Sarcophilus harrisii ENSSHAG00000011260 N
ZHX2 Sorex araneus ENSSARG00000013090 N
ZHX2 Sus scrofa ENSSSCG00000021586 N
ZHX2 Taeniopygia guttata ENSTGUG00000012413 N
ZHX2 Tursiops truncatus ENSTTRG00000016360 N