CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA02G11781 *(Glycine max)* TCP
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03634 (TCP)	IPR005333	GLYMA02G11781	T343853_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
PK12736.1 M01315_2.00	Cannabis sativa	NRRSCMYAYNNNNN	NNNNNRTRKGSYYN	PBM Lambert et al.(2019) pTH10121	0.974	0.605
TCP14 M07289_2.00	Arabidopsis thaliana	AVADAKVDBGTGGGDCCCAC	GTGGGHCCCACVHBMTHTBT	Dap-seq OMalley et al.(2016) TCP14_col_b	0.973	0.571
TCP15 M00892_2.00	Arabidopsis thaliana	NNGGNCCCAC	GTGGGNCCNN	PBM Franco-Zorrilla et al.(2014) TCP15	0.969	0.544
TCP15 M07277_2.00	Arabidopsis thaliana	RTRGGDCCCACHH	DDGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At1g69690_col_a	0.969	0.544
TCP15 M07278_2.00	Arabidopsis thaliana	RTRGGNCCCACHW	WDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g69690_colamp_a	0.969	0.544
TCP15 M11394_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP15_01	0.969	0.544
TCP8 M01311_2.00	Arabidopsis thaliana	NGGNMCCAC	GTGGKNCCN	PBM Lambert et al.(2019) pTH11569	0.968	0.537
TCP23 M00891_2.00	Arabidopsis thaliana	NNGGKCCCAC	GTGGGMCCNN	PBM Franco-Zorrilla et al.(2014) TCP23	0.964	0.551
TCP22 M07279_2.00	Arabidopsis thaliana	RTRGGNCCCACHN	NDGTGGGNCCYAY	Dap-seq OMalley et al.(2016) At1g72010_colamp_a	0.961	0.497
TCP22 M07280_2.00	Arabidopsis thaliana	RTGGGDCCCACNN	NNGTGGGHCCCAY	Dap-seq OMalley et al.(2016) At1g72010_col	0.961	0.497
TCP9 M01086_2.00	Arabidopsis thaliana	NNGGGCCCACN	NGTGGGCCCNN	PBM Sullivan et al.(2014) pTH9796	0.958	0.422
TCP9 M07281_2.00	Arabidopsis thaliana	RTGGGDCCCAC	GTGGGHCCCAY	Dap-seq OMalley et al.(2016) At2g45680_colamp_a	0.958	0.422
TCP9 M07282_2.00	Arabidopsis thaliana	DGTGGGRCCCACDDNDNDNBN	NVNHNHNHHGTGGGYCCCACH	Dap-seq OMalley et al.(2016) At2g45680_col_b	0.958	0.422
PK13314.1 M01316_2.00	Cannabis sativa	NNGGNCCCAC	GTGGGNCCNN	PBM Lambert et al.(2019) pTH11330	0.955	0.435
cassava45561.m1 M02516_2.00	Manihot esculenta	KGGVCCCACH	DGTGGGBCCM	PBM Weirauch et al.(2014) pTH9207	0.954	0.435
VIT_15s0048g01150 M02515_2.00	Vitis vinifera	NNGGNCCCAC	GTGGGNCCNN	PBM Weirauch et al.(2014) pTH9294	0.954	0.401
GLYMA19G26560 M02511_2.00	Glycine max	BGGBCCCAC	GTGGGVCCV	PBM Weirauch et al.(2014) pTH9184	0.954	0.435
AT-TCP20 M02507_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9229	0.953	0.401
PK14653.1 M01317_2.00	Cannabis sativa	BGGSCCCAC	GTGGGSCCV	PBM Lambert et al.(2019) pTH11324	0.952	0.408
PK14653.1 M02517_2.00	Cannabis sativa	BTGGGCCCAV	BTGGGCCCAV	PBM Weirauch et al.(2014) pTH9586	0.952	0.408
TCP20 M02502_2.00	Arabidopsis thaliana	GGSCCCACNN	NNGTGGGSCC	PBM Weirauch et al.(2014) pTH8159	0.952	0.395
TCP20 M07285_2.00	Arabidopsis thaliana	NNNNNNNNNNGTGGGRCCCAC	GTGGGYCCCACNNNNNNNNNN	Dap-seq OMalley et al.(2016) TCP20_col_a	0.952	0.395
TCP20 M07286_2.00	Arabidopsis thaliana	RTGGGDCCCACH	DGTGGGHCCCAY	Dap-seq OMalley et al.(2016) TCP20_colamp_a	0.952	0.395
TCP20 M11397_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP20_01	0.952	0.395
LjSGA_053525.1 M02518_2.00	Lotus japonicus	GGNCCCAC	GTGGGNCC	PBM Weirauch et al.(2014) pTH9201	0.951	0.408
TCP21 M07292_2.00	Arabidopsis thaliana	NNRTGGGDCCCACN	NGTGGGHCCCAYNN	Dap-seq OMalley et al.(2016) At5g08330_col_a	0.951	0.429
TCP21 M07293_2.00	Arabidopsis thaliana	RTRGGDCCCACH	DGTGGGHCCYAY	Dap-seq OMalley et al.(2016) At5g08330_colamp_a	0.951	0.429
fgenesh2_kg.8__1074__AT5G51910.2 M02509_2.00	Arabidopsis lyrata	GRSCCCAC	GTGGGSYC	PBM Weirauch et al.(2014) pTH9232	0.950	0.401
TCP19 M02504_2.00	Arabidopsis thaliana	NNGGVCCCAC	GTGGGBCCNN	PBM Weirauch et al.(2014) pTH7452	0.950	0.395
PCF2 M11399_2.00	Oryza sativa	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$PCF2_01	0.948	0.408
TCP7 M07294_2.00	Arabidopsis thaliana	RTGGGNCCCAC	GTGGGNCCCAY	Dap-seq OMalley et al.(2016) TCP7_col_a	0.947	0.401
OsI_08196 M02513_2.00	Oryza sativa	GGGCCCAC	GTGGGCCC	PBM Weirauch et al.(2014) pTH9274	0.944	0.388
OS02G0635800 M02512_2.00	Oryza sativa	NBGGGCCCVN	NBGGGCCCVN	PBM Weirauch et al.(2014) pTH8856	0.944	0.381
TCP11 M11395_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_01	0.894	0.381
TCP11 M11396_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$TCP11_02	0.894	0.381
For this family, TFs with SR scores > 0.822* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA02G11781.1	TCP	73	268	SSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSTSAAAAAAAQLRSRAEWDRSMSMVMEDSRRSMLENTSSISAILNFNPMGNVNVIQQAKQELREESGGGGGLESVASDSDGSLGRKRRPEQELSQMGS
GLYMA02G11781.2	TCP	73	268	SSTKDRHTKVDGRGRRIRMPAACAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSTMSAPSHYFRGNYFNPSTFSTSAAAAAAAQLRSRAEWDRSMSMVMEDSRRSMLENTSSISAILNFNPMGNVNVIQQAKQELREESGGGGGLESVASDSDGSLGRKRRPEQELSQMGS

Links
Other TCP family TFs
Other *Glycine max* TFs

658 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
CADAFLAG00000350	Aspergillus flavus	CADAFLAG00000350	N
ANIA_07867	Aspergillus nidulans	CADANIAG00003882	N
CADAORAG00002343	Aspergillus oryzae	CADAORAG00002343	N
ATEG_08370	Aspergillus terreus	CADATEAG00005065	N
AUEXF2481DRAFT_422292	Aureobasidium subglaciale	AUEXF2481DRAFT_422292	N
COCC4DRAFT_62224	Bipolaris maydis	COCC4DRAFT_62224	N
COCVIDRAFT_42469	Bipolaris victoriae	COCVIDRAFT_42469	N
PVAR5_4693	Byssochlamys spectabilis	PVAR5_4693	N
estExt_Genewise1Plus.C_100437	Cochliobolus heterostrophus C5	estExt_Genewise1Plus.C_100437	N
Cob_11269	Colletotrichum orbiculare	Cob_11269	N
W97_06772	Coniosporium apollinis	W97_06772	N
H072_6817	Dactylellina haptotyla	H072_6817	N
MGG_07845	Magnaporthe oryzae	MGG_07845	N
MAPG_09377	Magnaporthe poae	MAPG_09377	N
MAC_06346	Metarhizium acridum	MAC_06346	N
MANI_020045	Metarhizium anisopliae	MANI_020045	N
MBR_00971	Metarhizium brunneum	MBR_00971	N
MGU_07705	Metarhizium guizhouense	MGU_07705	N
MAJ_07613	Metarhizium majus	MAJ_07613	N
X797_007108	Metarhizium robertsii	X797_007108	N
NFIA_057610	Neosartorya fischeri	CADNFIAG00005295	N
S40288_03847	Stachybotrys chartarum	S40288_03847	N
S40285_07120	Stachybotrys chlorohalonata	S40285_07120	N
PMAA_094680	Talaromyces marneffei	PMAA_094680	N
TSTA_046470	Talaromyces stipitatus	TSTA_046470	N
TRIVIDRAFT_28900	Trichoderma virens	TRIVIDRAFT_28900	N
TRIVIDRAFT_52546	Trichoderma virens	TRIVIDRAFT_52546	N
VDBG_09590	Verticillium albo atrum	VDBG_09590	N
VDBG_09590	Verticillium alfalfae	VDBG_09590	N

GLYMA02G11781 (Glycine max) TCP

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

658 Related TFs

GLYMA02G11781 **(Glycine max)
TCP**