OBART02G32460 (Oryza barthii)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 OBART02G32460 T344067_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.876 0.520
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.868 0.507
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.855 0.467
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.855 0.467
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.842 0.520
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.835 0.520
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OBART02G32460.1 TCP 31 123

Links

Other TCP family TFs
Other Oryza barthii TFs

243 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000013007 Ailuropoda melanoleuca ENSAMEG00000013007 I
ENSAPLG00000004837 Anas platyrhynchos ENSAPLG00000004837 I
KMT2A Anolis carolinensis ENSACAG00000007014 I
Afo_R004252 Aptenodytes forsteri Afo_R004252 I
ENSAMXG00000001402 Astyanax mexicanus ENSAMXG00000001402 I
ENSP00000352262-D1 Bos grunniens ENSP00000352262-D1 I
KMT2A Bos taurus ENSBTAG00000018093 I
Brh_R004761 Buceros rhinoceros Brh_R004761 I
KMT2A Callithrix jacchus ENSCJAG00000013288 I
Aan_R001407 Calypte anna Aan_R001407 I
KMT2A Canis familiaris ENSCAFG00000012691 I
KMT2A Cavia porcellus ENSCPOG00000005813 I
Cmyd_10004923 Chelonia mydas Cmyd_10004923 I
ENSCSAG00000002585 Chlorocebus sabaeus ENSCSAG00000002585 I
KMT2A Choloepus hoffmanni ENSCHOG00000007116 I
kmt2a Danio rerio ENSDARG00000004537 I
KMT2A Dasypus novemcinctus ENSDNOG00000011530 I
Kmt2a Dipodomys ordii ENSDORG00000007239 I
KMT2A Echinops telfairi ENSETEG00000009695 I
KMT2A Equus caballus ENSECAG00000007743 I
KMT2A Erinaceus europaeus ENSEEUG00000015428 I
ENSFCAG00000031139 Felis catus ENSFCAG00000031139 I
ENSFALG00000009959 Ficedula albicollis ENSFALG00000009959 I
ENSGMOG00000011724 Gadus morhua ENSGMOG00000011724 I
ENSGALG00000006818 Gallus gallus ENSGALG00000006818 I
kmt2a Gasterosteus aculeatus ENSGACG00000009009 I
Gfo_R005086 Geospiza fortis Gfo_R005086 I
KMT2A Gorilla gorilla ENSGGOG00000000946 I
KMT2A Homo sapiens ENSG00000118058 D
ENSSTOG00000014405 Ictidomys tridecemlineatus ENSSTOG00000014405 I
ENSLACG00000018124 Latimeria chalumnae ENSLACG00000018124 I
ENSLOCG00000004045 Lepisosteus oculatus ENSLOCG00000004045 I
KMT2A Loxodonta africana ENSLAFG00000014805 I
ENSP00000352262 Macaca fascicularis ENSP00000352262 I
KMT2A Macaca mulatta ENSMMUG00000005482 I
ENSMEUG00000000157 Macropus eugenii ENSMEUG00000000157 I
KMT2A Meleagris gallopavo ENSMGAG00000002737 I
KMT2A Monodelphis domestica ENSMODG00000013474 I
ENSMPUG00000004640 Mustela putorius furo ENSMPUG00000004640 I
Kmt2a Mus musculus ENSMUSG00000002028 I
Myotis_brandtii_MLL_10033553 Myotis brandtii Myotis_brandtii_MLL_10033553 I
KMT2A Myotis lucifugus ENSMLUG00000014086 I
ENSNLEG00000007365 Nomascus leucogenys ENSNLEG00000007365 I
KMT2A Ochotona princeps ENSOPRG00000011275 I
Ogr09611 Ophisaurus gracilis Ogr09611 I
ENSONIG00000006229 Oreochromis niloticus ENSONIG00000006229 I
ENSOANG00000003760 Ornithorhynchus anatinus ENSOANG00000003760 I
KMT2A Oryctolagus cuniculus ENSOCUG00000010127 I
kmt2a Oryzias latipes ENSORLG00000007666 I
KMT2A Otolemur garnettii ENSOGAG00000009345 I
ENSOARG00000009830 Ovis aries ENSOARG00000009830 I
KMT2A Pan troglodytes ENSPTRG00000004344 I
ENSPANG00000009309 Papio anubis ENSPANG00000009309 I
ENSPSIG00000007140 Pelodiscus sinensis ENSPSIG00000007140 I
ENSPFOG00000015779 Poecilia formosa ENSPFOG00000015779 I
Pvit_19329 Pogona vitticeps Pvit_19329 I
ENSPPYG00000003935 Pongo abelii ENSPPYG00000003935 I
KMT2A Procavia capensis ENSPCAG00000005322 I
KMT2A Pteropus vampyrus ENSPVAG00000006246 I
Kmt2a Rattus norvegicus ENSRNOG00000015133 I
ENSSHAG00000012641 Sarcophilus harrisii ENSSHAG00000012641 I
KMT2A Sorex araneus ENSSARG00000014520 I
KMT2A Taeniopygia guttata ENSTGUG00000000065 I
kmt2a Takifugu rubripes ENSTRUG00000015266 I
ENSTSYG00000012197 Tarsius syrichta ENSTSYG00000012197 I
kmt2a Tetraodon nigroviridis ENSTNIG00000019281 I
KMT2A Tupaia belangeri ENSTBEG00000010928 I
KMT2A Tursiops truncatus ENSTTRG00000004289 I
KMT2A Vicugna pacos ENSVPAG00000005587 I
kmt2a Xenopus tropicalis XB-GENE-922912 D
XP_002932944 Xenopus tropicalis XP_002932944 I
XP_002932945 Xenopus tropicalis XP_002932945 I
ENSXMAG00000008735 Xiphophorus maculatus ENSXMAG00000008735 I