ONIVA01G09270 (Oryza nivara)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 ONIVA01G09270 T344135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.982 1.000
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.944 0.529
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.942 0.521
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.938 0.513
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.938 0.513
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.938 0.513
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.893 0.437
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.888 0.412
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.878 0.412
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.878 0.412
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.874 0.370
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.868 0.412
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.868 0.412
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.868 0.387
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.835 0.370
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.835 0.370
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G09270.1 TCP 211 390

Links

Other TCP family TFs
Other Oryza nivara TFs

436 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BBA_01545 Beauveria bassiana BBA_01545 N
BGHDH14_bgh04116 Blumeria graminis BGHDH14_bgh04116 N
CPUR_00596 Claviceps purpurea CPUR_00596 N
CGGC5_3996 Colletotrichum gloeosporioides CGGC5_3996 N
GLRG_10810 Colletotrichum graminicola GLRG_10810 N
CH063_07308 Colletotrichum higginsianum CH063_07308 N
Cob_01816 Colletotrichum orbiculare Cob_01816 N
CSUB01_04200 Colletotrichum sublineola CSUB01_04200 N
CCM_00998 Cordyceps militaris CCM_00998 N
FFUJ_13265 Fusarium fujikuroi FFUJ_13265 N
FGRRES_06071 Fusarium graminearum FGRRES_06071 N
FOXG_07781 Fusarium oxysporum FOXG_07781 N
FPSE_04226 Fusarium pseudograminearum FPSE_04226 N
NechaG60026 Fusarium solani NechaG60026 N
FVEG_04708 Fusarium verticillioides FVEG_04708 N
MAC_09480 Metarhizium acridum MAC_09480 N
MAM_04763 Metarhizium album MAM_04763 N
MANI_012588 Metarhizium anisopliae MANI_012588 N
MBR_03064 Metarhizium brunneum MBR_03064 N
MGU_04765 Metarhizium guizhouense MGU_04765 N
MAJ_05808 Metarhizium majus MAJ_05808 N
MYCTH_2305929 Myceliophthora thermophila MYCTH_2305929 N
estExt_Genewise1.C_sca_3_chr4_2_00632 Nectria haematococca estExt_Genewise1.C_sca_3_chr4_2_00632 N
estExt_Genewise1.C_90051 Neurospora discreta estExt_Genewise1.C_90051 N
OCS_06782 Ophiocordyceps sinensis OCS_06782 N
SMAC_08547 Sordaria macrospora SMAC_08547 N
S40288_01911 Stachybotrys chartarum S40288_01911 N
S40285_02142 Stachybotrys chlorohalonata S40285_02142 N
UCRPA7_6046 Togninia minima UCRPA7_6046 N
TRIATDRAFT_161664 Trichoderma atroviride TRIATDRAFT_161664 N
TRIREDRAFT_77609 Trichoderma reesei TRIREDRAFT_77609 N
TRIVIDRAFT_36951 Trichoderma virens TRIVIDRAFT_36951 N
UREG_07450 Uncinocarpus reesii UREG_07450 N
UV8b_5421 Ustilaginoidea virens UV8b_5421 N
VDBG_03434 Verticillium albo atrum VDBG_03434 N
VDBG_03434 Verticillium alfalfae VDBG_03434 N
VDAG_09953 Verticillium dahliae VDAG_09953 N