Solyc02g089830.1 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc02g089830.1 T344403_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.925 0.348
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.925 0.348
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.925 0.348
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.924 0.348
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc02g089830.1.1 TCP 63 153
Solyc02g089830.1.1 TCP 138 184

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g07980 Acanthocheilonema viteae nAv.1.0.1.g07980 N
ASIM_0001797201 Anisakis simplex ASIM_0001797201 N
ASU_07850 Ascaris suum ASU_07850 N
ASU_10156 Ascaris suum ASU_10156 N
Bm9357 Brugia malayi Bm9357 N
nDi.2.2.2.g10211 Dirofilaria immitis nDi.2.2.2.g10211 N
DME_0000394001 Dracunculus medinensis DME_0000394001 N
EVEC_0000016901 Enterobius vermicularis EVEC_0000016901 N
nLs.2.1.2.g09588 Litomosoides sigmodontis nLs.2.1.2.g09588 N
LOAG_16689 Loa loa LOAG_16689 N
OFLC_0001521701 Onchocerca flexuosa OFLC_0001521701 N
nOo.2.0.1.g08345 Onchocerca ochengi nOo.2.0.1.g08345 N
WBGene00244696 Onchocerca volvulus WBGene00244696 N
TCLT_0000203401 Thelazia callipaeda TCLT_0000203401 N
WUBG_11490 Wuchereria bancrofti WUBG_11490 N