Solyc07g062680.1 (Solanum lycopersicum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 Solyc07g062680.1 T344421_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.953 0.443
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.951 0.437
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.948 0.443
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.947 0.392
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.947 0.392
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.947 0.392
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.904 0.354
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.887 0.329
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.887 0.329
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.875 0.316
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.855 0.285
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.850 0.278
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.285
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.285
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Solyc07g062680.1.1 TCP 28 250

Links

Other TCP family TFs
Other Solanum lycopersicum TFs

420 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL001637 Aedes aegypti AAEL001637 N
AALB001160 Anopheles albimanus AALB001160 N
AARA012018 Anopheles arabiensis AARA012018 N
AATE020717 Anopheles atroparvus AATE020717 N
ACHR003205 Anopheles christyi ACHR003205 N
ACOM030968 Anopheles coluzzii ACOM030968 N
ACUA013501 Anopheles culicifacies ACUA013501 N
ADIR000747 Anopheles dirus ADIR000747 N
AEPI000388 Anopheles epiroticus AEPI000388 N
AFAF015377 Anopheles farauti AFAF015377 N
AFUN010327 Anopheles funestus AFUN010327 N
AGAP007822 Anopheles gambiae AGAP007822 N
AMAM021192 Anopheles maculatus AMAM021192 N
AMEC002017 Anopheles melas AMEC002017 N
AMEM014363 Anopheles merus AMEM014363 N
AMIN006409 Anopheles minimus AMIN006409 N
AQUA003680 Anopheles quadriannulatus AQUA003680 N
ASTEI01637 Anopheles stephensi ASTEI01637 N
CPIJ000955 Culex quinquefasciatus CPIJ000955 N