TCM_014288 (Theobroma cacao)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03634 (TCP) IPR005333 TCM_014288 T344440_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.944 0.468
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.944 0.460
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.930 0.403
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.927 0.424
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.927 0.424
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.915 0.388
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.915 0.388
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.870 0.374
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.857 0.338
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.833 0.302
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.824 0.295
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.822 0.324
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.822 0.324
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.822 0.324
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EOY22094 TCP 48 214

Links

Other TCP family TFs
Other Theobroma cacao TFs

313 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_26930 Aegilops tauschii F775_26930 N
AMTR_s00129p00111730 Amborella trichopoda AMTR_s00129p00111730 N
Aquca_013_00919 Aquilegia coerulea Aquca_013_00919 N
Aquca_020_00580 Aquilegia coerulea Aquca_020_00580 N
fgenesh2_kg.5__785__AT3G43240.1 Arabidopsis lyrata fgenesh2_kg.5__785__AT3G43240.1 N
ARID4 Arabidopsis thaliana AT3G43240 N
Bostr.0556s0671 Boechera stricta Bostr.0556s0671 N
BRADI3G37377 Brachypodium distachyon BRADI3G37377 N
BRADI3G37397 Brachypodium distachyon BRADI3G37397 N
BRADI4G31016 Brachypodium distachyon BRADI4G31016 N
Bo3g127310 Brassica oleracea Bo3g127310 N
Bra034957 Brassica rapa Bra034957 N
PK11738.1 Cannabis sativa PK11738.1 N
Cagra.4079s0001 Capsella grandiflora Cagra.4079s0001 N
Carubv10016730m.g Capsella rubella Carubv10016730m.g N
evm.TU.supercontig_82.51 Carica papaya evm.TU.supercontig_82.51 N
CHLREDRAFT_186244 Chlamydomonas reinhardtii CHLREDRAFT_186244 N
estExt_fgeneshCV_pg.C_50315 Chlorella vulgaris estExt_fgeneshCV_pg.C_50315 N
Ca_16182 Cicer arietinum Ca_16182 N
Ca_18326 Cicer arietinum Ca_18326 N
Cla012753 Citrullus lanatus Cla012753 N
Cla015761 Citrullus lanatus Cla015761 N
Ciclev10007563m.g Citrus clementina Ciclev10007563m.g N
orange1.1g004566m.g Citrus sinensis orange1.1g004566m.g N
estExt_fgenesh1_pg.C_50294 Coccomyxa subellipsoidea C169 estExt_fgenesh1_pg.C_50294 N
Cucsa.149260 Cucumis sativus Cucsa.149260 N
Cucsa.359860 Cucumis sativus Cucsa.359860 N
Eucgr.C00764 Eucalyptus grandis Eucgr.C00764 N
Eucgr.I02158 Eucalyptus grandis Eucgr.I02158 N
Thhalv10002415m.g Eutrema salsugineum Thhalv10002415m.g N
GLYMA07G05050 Glycine max GLYMA07G05050 N
GLYMA09G08690 Glycine max GLYMA09G08690 N
GLYMA15G20380 Glycine max GLYMA15G20380 N
GLYMA16G01560 Glycine max GLYMA16G01560 N
Gorai.001G018000 Gossypium raimondii Gorai.001G018000 N
Gorai.009G038600 Gossypium raimondii Gorai.009G038600 N
Gorai.010G095800 Gossypium raimondii Gorai.010G095800 N
HelroG69268 Helobdella robusta HelroG69268 N
MLOC_66426 Hordeum vulgare MLOC_66426 N
LPERR09G08040 Leersia perrieri LPERR09G08040 N
Lus10027658.g Linum usitatissimum Lus10027658.g N
Lus10039924.g Linum usitatissimum Lus10039924.g N
MDP0000214795 Malus domestica MDP0000214795 N
MDP0000233594 Malus domestica MDP0000233594 N
MDP0000244853 Malus domestica MDP0000244853 N
MDP0000310024 Malus domestica MDP0000310024 N
MTR_2g044550 Medicago truncatula MTR_2g044550 N
MTR_8g022980 Medicago truncatula MTR_8g022980 N
mgf013854m Mimulus guttatus mgf013854m N
GSMUA_Achr10G18680_001 Musa acuminata GSMUA_Achr10G18680_001 N
GSMUA_Achr11G09250_001 Musa acuminata GSMUA_Achr11G09250_001 N
GSMUA_Achr3G05790_001 Musa acuminata GSMUA_Achr3G05790_001 N
OBART08G16790 Oryza barthii OBART08G16790 N
OBART09G11370 Oryza barthii OBART09G11370 N
OB09G17930 Oryza brachyantha OB09G17930 N
ORGLA08G0146400 Oryza glaberrima ORGLA08G0146400 N
ORGLA09G0085300 Oryza glaberrima ORGLA09G0085300 N
OGLUM08G17510 Oryza glumaepatula OGLUM08G17510 N
OGLUM09G11760 Oryza glumaepatula OGLUM09G11760 N
BGIOSGA026888 Oryza indica BGIOSGA026888 N
BGIOSGA029700 Oryza indica BGIOSGA029700 N
OLONG_007387 Oryza longistaminata OLONG_007387 N
OMERI01G15670 Oryza meridionalis OMERI01G15670 N
ONIVA08G18320 Oryza nivara ONIVA08G18320 N
ONIVA09G11150 Oryza nivara ONIVA09G11150 N
OPUNC08G14680 Oryza punctata OPUNC08G14680 N
OPUNC09G09840 Oryza punctata OPUNC09G09840 N
ORUFI08G18650 Oryza rufipogon ORUFI08G18650 N
ORUFI09G12160 Oryza rufipogon ORUFI09G12160 N
OS08G0451400 Oryza sativa OS08G0451400 N
OSTLU_27261 Ostreococcus lucimarinus OSTLU_27261 N
OSTLU_94134 Ostreococcus lucimarinus OSTLU_94134 N
Pavir.Bb02255 Panicum virgatum Pavir.Bb02255 N
Pavir.Fa00815 Panicum virgatum Pavir.Fa00815 N
Pavir.Fb01510 Panicum virgatum Pavir.Fb01510 N
Pavir.J03302 Panicum virgatum Pavir.J03302 N
PDK_20s1317301g006 Phoenix dactylifera PDK_20s1317301g006 N
PDK_20s1329251g001 Phoenix dactylifera PDK_20s1329251g001 N
PDK_20s1668051g003 Phoenix dactylifera PDK_20s1668051g003 N
e_gw1.53.164.1 Physcomitrella patens e_gw1.53.164.1 N
gw1.211.7.1 Physcomitrella patens gw1.211.7.1 N
POPTR_0006s13780 Populus trichocarpa POPTR_0006s13780 N
POPTR_0018s07250 Populus trichocarpa POPTR_0018s07250 N
Pm013168 Prunus mume Pm013168 N
PRUPE_ppa001668mg Prunus persica PRUPE_ppa001668mg N
29739.m003683 Ricinus communis 29739.m003683 N
SapurV1A.0121s0150 Salix purpurea SapurV1A.0121s0150 N
SapurV1A.0249s0150 Salix purpurea SapurV1A.0249s0150 N
SELMODRAFT_431374 Selaginella moellendorffii SELMODRAFT_431374 N
SELMODRAFT_449331 Selaginella moellendorffii SELMODRAFT_449331 N
Si013293m.g Setaria italica Si013293m.g N
Si029019m.g Setaria italica Si029019m.g N
Solyc12g049570.1 Solanum lycopersicum Solyc12g049570.1 N
PGSC0003DMG400028852 Solanum tuberosum PGSC0003DMG400028852 N
Sb02g025515 Sorghum bicolor Sb02g025515 N
Sb07g022155 Sorghum bicolor Sb07g022155 N
TCM_037452 Theobroma cacao TCM_037452 N
Traes_5AL_0CF3E9D4A Triticum aestivum Traes_5AL_0CF3E9D4A N
Traes_5BL_114179614 Triticum aestivum Traes_5BL_114179614 N
Traes_5DL_E48356A5C Triticum aestivum Traes_5DL_E48356A5C N
TRIUR3_24005 Triticum urartu TRIUR3_24005 N
VIT_09s0002g00430 Vitis vinifera VIT_09s0002g00430 N
VIT_11s0016g00370 Vitis vinifera VIT_11s0016g00370 N
estExt_fgenesh5_synt.C_400033 Volvox carteri estExt_fgenesh5_synt.C_400033 N
GRMZM2G138976 Zea mays GRMZM2G138976 N
GRMZM2G140156 Zea mays GRMZM2G140156 N
GRMZM5G866423 Zea mays GRMZM5G866423 N