29905.m000443 (Ricinus communis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 29905.m000443 T344579_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.943 0.439
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.935 0.413
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.935 0.413
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.919 0.355
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.919 0.355
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.915 0.361
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.913 0.394
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.863 0.342
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.841 0.297
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
29905.m000443 TCP 51 222

Links

Other TCP family TFs
Other Ricinus communis TFs

339 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACRE_020880 Acremonium chrysogenum ACRE_020880 N
AGABI2DRAFT_192530 Agaricus bisporus AGABI2DRAFT_192530 N
AGABI2DRAFT_56847 Agaricus bisporus AGABI2DRAFT_56847 N
M378DRAFT_176509 Amanita muscaria M378DRAFT_176509 I
BGHDH14_bgh03211 Blumeria graminis BGHDH14_bgh03211 I
BOTBODRAFT_99971 Botryobasidium botryosum BOTBODRAFT_99971 N
CERSUDRAFT_123639 Ceriporiopsis subvermispora CERSUDRAFT_123639 N
CC1G_07392 Coprinopsis cinerea CC1G_07392 N
CC1G_07617 Coprinopsis cinerea CC1G_07617 I
DICSQDRAFT_67430 Dichomitus squalens DICSQDRAFT_67430 I
DOTSEDRAFT_49782 Dothistroma septosporum DOTSEDRAFT_49782 I
FIBRA_02642 Fibroporia radiculosa FIBRA_02642 I
FIBRA_04764 Fibroporia radiculosa FIBRA_04764 I
FOMPIDRAFT_1081834 Fomitopsis pinicola FOMPIDRAFT_1081834 I
FOMPIDRAFT_1121239 Fomitopsis pinicola FOMPIDRAFT_1121239 N
FOMPIDRAFT_140591 Fomitopsis pinicola FOMPIDRAFT_140591 I
FPSE_08224 Fusarium pseudograminearum FPSE_08224 N
GALMADRAFT_227034 Galerina marginata GALMADRAFT_227034 N
GALMADRAFT_133211 Galerina marginata GALMADRAFT_133211 I
GLOTRDRAFT_38143 Gloeophyllum trabeum GLOTRDRAFT_38143 I
GYMLUDRAFT_71519 Gymnopus luxurians GYMLUDRAFT_71519 I
GYMLUDRAFT_43821 Gymnopus luxurians GYMLUDRAFT_43821 N
M413DRAFT_47178 Hebeloma cylindrosporum M413DRAFT_47178 N
Genemark.3077_g Heterobasidion annosum Genemark.3077_g N
HETIRDRAFT_476671 Heterobasidion irregulare HETIRDRAFT_476671 N
HYDPIDRAFT_99715 Hydnomerulius pinastri HYDPIDRAFT_99715 N
JAAARDRAFT_93592 Jaapia argillacea JAAARDRAFT_93592 I
K443DRAFT_1017 Laccaria amethystina K443DRAFT_1017 N
LACBIDRAFT_386478 Laccaria bicolor LACBIDRAFT_386478 N
SAKL0F03872g Lachancea kluyveri SAKL0F03872g I
MELLADRAFT_94219 Melampsora laricipopulina MELLADRAFT_94219 N
MANI_028883 Metarhizium anisopliae MANI_028883 I
MGU_03716 Metarhizium guizhouense MGU_03716 N
MAJ_03732 Metarhizium majus MAJ_03732 N
X797_003479 Metarhizium robertsii X797_003479 N
MVLG_04343 Microbotryum violaceum MVLG_04343 N
MVLG_00343 Microbotryum violaceum MVLG_00343 N
E5Q_02264 Mixia osmundae E5Q_02264 N
Moror_9770 Moniliophthora roreri Moror_9770 I
Moror_9029 Moniliophthora roreri Moror_9029 N
Moror_17490 Moniliophthora roreri Moror_17490 I
PAXRUDRAFT_55546 Paxillus rubicundulus PAXRUDRAFT_55546 N
PAXRUDRAFT_827004 Paxillus rubicundulus PAXRUDRAFT_827004 N
PAXRUDRAFT_95391 Paxillus rubicundulus PAXRUDRAFT_95391 I
PHACADRAFT_54114 Phanerochaete carnosa PHACADRAFT_54114 N
PILCRDRAFT_57544 Piloderma croceum PILCRDRAFT_57544 N
PIIN_01319 Piriformospora indica PIIN_01319 N
PISMIDRAFT_39129 Pisolithus microcarpus PISMIDRAFT_39129 I
PISMIDRAFT_80640 Pisolithus microcarpus PISMIDRAFT_80640 N
M404DRAFT_69579 Pisolithus tinctorius M404DRAFT_69579 I
M404DRAFT_551810 Pisolithus tinctorius M404DRAFT_551810 N
POSPLDRAFT_104707 Postia placenta POSPLDRAFT_104707 I
POSPLDRAFT_42762 Postia placenta POSPLDRAFT_42762 I
POSPLDRAFT_43059 Postia placenta POSPLDRAFT_43059 I
PAN0_018c5621 Pseudozyma antarctica PAN0_018c5621 N
PaG_05617 Pseudozyma aphidis PaG_05617 N
PSEUBRA_SCAF20g03099 Pseudozyma brasiliensis PSEUBRA_SCAF20g03099 N
PHSY_001785 Pseudozyma hubeiensis PHSY_001785 N
PGTG_16202 Puccinia graminis PGTG_16202 I
PTRG_10423 Pyrenophora triticirepentis PTRG_10423 I
GLOINDRAFT_45684 Rhizophagus irregularis GLOINDRAFT_45684 I
GLOINDRAFT_49399 Rhizophagus irregularis GLOINDRAFT_49399 I
GLOINDRAFT_344442 Rhizophagus irregularis GLOINDRAFT_344442 N
GLOINDRAFT_26890 Rhizophagus irregularis GLOINDRAFT_26890 N
RHTO_05563 Rhodosporidium toruloides RHTO_05563 N
RTG_00382 Rhodotorula glutinis RTG_00382 N
SCHCODRAFT_107892 Schizophyllum commune SCHCODRAFT_107892 N
SCHCODRAFT_238903 Schizophyllum commune SCHCODRAFT_238903 I
SJAG_05153 Schizosaccharomyces japonicus SJAG_05153 I
mat3-Mc Schizosaccharomyces pombe SPBC1711.02 I
mat1-Mc Schizosaccharomyces pombe SPBC23G7.09 D
mat3-Mc Schizosaccharomyces pombe SPMTR.04 I
SCLCIDRAFT_6962 Scleroderma citrinum SCLCIDRAFT_6962 I
SCLCIDRAFT_11527 Scleroderma citrinum SCLCIDRAFT_11527 N
SBOR_9074 Sclerotinia borealis SBOR_9074 I
SS1G_04006 Sclerotinia sclerotiorum SS1G_04006 I
M408DRAFT_22846 Serendipita vermifera M408DRAFT_22846 N
M408DRAFT_20648 Serendipita vermifera M408DRAFT_20648 N
SERLA73DRAFT_84266 Serpula lacrymans SERLA73DRAFT_84266 I
SERLA73DRAFT_71121 Serpula lacrymans SERLA73DRAFT_71121 I
M422DRAFT_267643 Sphaerobolus stellatus M422DRAFT_267643 N
M422DRAFT_91926 Sphaerobolus stellatus M422DRAFT_91926 I
M422DRAFT_195883 Sphaerobolus stellatus M422DRAFT_195883 N
M422DRAFT_111122 Sphaerobolus stellatus M422DRAFT_111122 I
M422DRAFT_114792 Sphaerobolus stellatus M422DRAFT_114792 N
M422DRAFT_121750 Sphaerobolus stellatus M422DRAFT_121750 N
M422DRAFT_126587 Sphaerobolus stellatus M422DRAFT_126587 N
M422DRAFT_146751 Sphaerobolus stellatus M422DRAFT_146751 N
SEPMUDRAFT_160654 Sphaerulina musiva SEPMUDRAFT_160654 I
sr16650 Sporisorium reilianum sr16650 N
fgenesh1_pg.C_scaffold_8000024 Sporobolomyces roseus fgenesh1_pg.C_scaffold_8000024 N
CY34DRAFT_56447 Suillus luteus CY34DRAFT_56447 N
BN946_scf184994.g60 Trametes cinnabarina BN946_scf184994.g60 N
BN946_scf184994.g55 Trametes cinnabarina BN946_scf184994.g55 I
BN946_scf184844.g19 Trametes cinnabarina BN946_scf184844.g19 N
M407DRAFT_219396 Tulasnella calospora M407DRAFT_219396 N
UHOR_08562 Ustilago hordei UHOR_08562 N
UM06025 Ustilago maydis UM06025 N
J056_002105 Wallemia ichthyophaga J056_002105 N