cassava2420.valid.m1 (Manihot esculenta)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 cassava2420.valid.m1 T344602_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.947 0.606
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.939 0.555
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.938 0.548
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.891 0.361
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.889 0.323
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.889 0.323
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.886 0.310
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.886 0.310
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.883 0.303
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.883 0.303
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.883 0.303
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.883 0.316
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.881 0.329
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.877 0.303
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.864 0.297
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.864 0.297
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
cassava2420.valid.m1 TCP 87 243

Links

Other TCP family TFs
Other Manihot esculenta TFs

444 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AB10636.1 Alternaria brassicicola AB10636.1 N 0.000
AOL_s00076g272 Arthrobotrys oligospora AOL_s00076g272 N 0.000
ARB_01321 Arthroderma benhamiae ARB_01321 I 0.000
MCYG_02230 Arthroderma otae MCYG_02230 I 0.000
MCYG_05833 Arthroderma otae MCYG_05833 I 0.000
fgenesh1_pm.00866_#_274 Aspergillus carbonarius fgenesh1_pm.00866_#_274 I 0.000
ACLA_070410 Aspergillus clavatus CADACLAG00006808 N 0.000
CADAFLAG00007096 Aspergillus flavus CADAFLAG00007096 I 0.000
AFUA_2G11460 Aspergillus fumigatus CADAFUAG00004521 I 0.000
AFUA_5G11070 Aspergillus fumigatus CADAFUAG00005917 I 0.000
CADAORAG00008740 Aspergillus oryzae CADAORAG00008740 I 0.000
EURHEDRAFT_417798 Aspergillus ruber EURHEDRAFT_417798 I 0.000
EURHEDRAFT_528519 Aspergillus ruber EURHEDRAFT_528519 I 0.000
ATEG_07690 Aspergillus terreus CADATEAG00003243 I 0.000
M438DRAFT_344531 Aureobasidium pullulans M438DRAFT_344531 I 0.000
AUEXF2481DRAFT_456199 Aureobasidium subglaciale AUEXF2481DRAFT_456199 I 0.000
BAUCODRAFT_124270 Baudoinia compniacensis BAUCODRAFT_124270 I 0.000
BBA_01514 Beauveria bassiana BBA_01514 I 0.000
COCC4DRAFT_19355 Bipolaris maydis COCC4DRAFT_19355 I 0.000
COCC4DRAFT_63629 Bipolaris maydis COCC4DRAFT_63629 N 0.000
COCMIDRAFT_101691 Bipolaris oryzae COCMIDRAFT_101691 N 0.000
COCMIDRAFT_24418 Bipolaris oryzae COCMIDRAFT_24418 I 0.000
COCSADRAFT_170559 Bipolaris sorokiniana COCSADRAFT_170559 N 0.000
COCSADRAFT_306311 Bipolaris sorokiniana COCSADRAFT_306311 I 0.000
COCVIDRAFT_108667 Bipolaris victoriae COCVIDRAFT_108667 N 0.000
COCVIDRAFT_12188 Bipolaris victoriae COCVIDRAFT_12188 I 0.000
COCCADRAFT_32122 Bipolaris zeicola COCCADRAFT_32122 I 0.000
COCCADRAFT_34097 Bipolaris zeicola COCCADRAFT_34097 N 0.000
BDDG_09744 Blastomyces dermatitidis BDDG_09744 I 0.000
Bcin07g01630 Botrytis cinerea Bcin07g01630 N 0.000
PVAR5_2500 Byssochlamys spectabilis PVAR5_2500 I 0.000
CIMG_04661 Coccidioides immitis CIMG_04661 I 0.000
CIMG_08192 Coccidioides immitis CIMG_08192 I 0.000
CPC735_022090 Coccidioides posadasii CPC735_022090 I 0.000
estExt_fgenesh1_pg.C_40169 Cochliobolus heterostrophus C5 estExt_fgenesh1_pg.C_40169 I 0.000
W97_02535 Coniosporium apollinis W97_02535 I 0.000
W97_05295 Coniosporium apollinis W97_05295 N 0.000
CCM_04341 Cordyceps militaris CCM_04341 I 0.000
H072_1134 Dactylellina haptotyla H072_1134 N 0.000
DOTSEDRAFT_88360 Dothistroma septosporum DOTSEDRAFT_88360 N 0.000
A1O9_01837 Exophiala aquamarina A1O9_01837 I 0.000
A1O9_03872 Exophiala aquamarina A1O9_03872 N 0.000
PV10_06359 Exophiala mesophila PV10_06359 I 0.000
PV06_07091 Exophiala oligosperma PV06_07091 N 0.000
PV06_08141 Exophiala oligosperma PV06_08141 I 0.000
PV11_00424 Exophiala sideris PV11_00424 N 0.000
PV08_06966 Exophiala spinifera PV08_06966 I 0.000
PV05_03582 Exophiala xenobiotica PV05_03582 I 0.000
PV05_05867 Exophiala xenobiotica PV05_05867 N 0.000
HCBG_04284 Histoplasma capsulatum HCBG_04284 N 0.000
LEMA_P057360.1 Leptosphaeria maculans LEMA_P057360.1 N 0.000
LEMA_P120870.1 Leptosphaeria maculans LEMA_P120870.1 I 0.000
MPH_05611 Macrophomina phaseolina MPH_05611 N 0.000
MBM_01678 Marssonina brunnea MBM_01678 I 0.000
MCYG_02230 Microsporum canis MCYG_02230 I 0.000
MCYG_05833 Microsporum canis MCYG_05833 I 0.000
MGYG_02927 Microsporum gypseum MGYG_02927 I 0.000
MGYG_06143 Microsporum gypseum MGYG_06143 I 0.000
gw1.59.15.1 Mycosphaerella fijiensis gw1.59.15.1 N 0.000
estExt_fgenesh1_pm.C_chr_50216 Mycosphaerella graminicola estExt_fgenesh1_pm.C_chr_50216 N 0.000
UCRNP2_3613 Neofusicoccum parvum UCRNP2_3613 N 0.000
NFIA_076190 Neosartorya fischeri CADNFIAG00007846 I 0.000
NFIA_086700 Neosartorya fischeri CADNFIAG00008233 I 0.000
OIDMADRAFT_152619 Oidiodendron maius OIDMADRAFT_152619 N 0.000
PABG_00737 Paracoccidioides brasiliensis PABG_00737 I 0.000
PAAG_03678 Paracoccidioides sp lutzii PAAG_03678 I 0.000
Pc15g00340 Penicillium chrysogenum Pc15g00340 N 0.000
Pc21g05540 Penicillium chrysogenum Pc21g05540 I 0.000
PDIP_10950 Penicillium digitatum PDIP_10950 N 0.000
PEX1_002010 Penicillium expansum PEX1_002010 N 0.000
PEX1_066340 Penicillium expansum PEX1_066340 I 0.000
PEX1_087000 Penicillium expansum PEX1_087000 I 0.000
PITC_033600 Penicillium italicum PITC_033600 I 0.000
PITC_054700 Penicillium italicum PITC_054700 I 0.000
PITC_071780 Penicillium italicum PITC_071780 N 0.000
PMAA_033170 Penicillium marneffei PMAA_033170 I 0.000
PMAA_048690 Penicillium marneffei PMAA_048690 N 0.000
PDE_09179 Penicillium oxalicum PDE_09179 I 0.000
PCH_Pc15g00340 Penicillium rubens PCH_Pc15g00340 N 0.000
PCH_Pc21g05540 Penicillium rubens PCH_Pc21g05540 I 0.000
U727_0043114071 Penicillium solitum U727_0043114071 I 0.000
U727_00433201101 Penicillium solitum U727_00433201101 N 0.000
U727_00434270371 Penicillium solitum U727_00434270371 I 0.000
PFICI_05184 Pestalotiopsis fici PFICI_05184 I 0.000
SNOG_13663 Phaeosphaeria nodorum SNOG_13663 N 0.000
MYCFIDRAFT_216484 Pseudocercospora fijiensis MYCFIDRAFT_216484 N 0.000
GMDG_07447 Pseudogymnoascus destructans GMDG_07447 N 0.000
PTT_11312 Pyrenophora teres PTT_11312 N 0.000
PTT_16310 Pyrenophora teres PTT_16310 I 0.000
PTRG_07169 Pyrenophora triticirepentis PTRG_07169 I 0.000
PTRG_11285 Pyrenophora triticirepentis PTRG_11285 N 0.000
SS1G_01353 Sclerotinia sclerotiorum SS1G_01353 N 0.000
SETTUDRAFT_172422 Setosphaeria turcica SETTUDRAFT_172422 N 0.000
SEPMUDRAFT_150864 Sphaerulina musiva SEPMUDRAFT_150864 N 0.000
SNOG_00909 Stagonospora nodorum SNOG_00909 I 0.000
SNOG_13663 Stagonospora nodorum SNOG_13663 N 0.000
PMAA_033170 Talaromyces marneffei PMAA_033170 I 0.000
PMAA_048690 Talaromyces marneffei PMAA_048690 N 0.000
TSTA_020390 Talaromyces stipitatus TSTA_020390 I 0.000
TSTA_038740 Talaromyces stipitatus TSTA_038740 I 0.000
TSTA_064390 Talaromyces stipitatus TSTA_064390 I 0.000
TEQG_05320 Trichophyton equinum TEQG_05320 I 0.000
TEQG_06790 Trichophyton equinum TEQG_06790 I 0.000
H101_03862 Trichophyton interdigitale H101_03862 I 0.000
H101_07358 Trichophyton interdigitale H101_07358 I 0.000
H102_03415 Trichophyton rubrum H102_03415 I 0.000
H105_03436 Trichophyton soudanense H105_03436 I 0.000
TESG_06426 Trichophyton tonsurans TESG_06426 I 0.000
TESG_06981 Trichophyton tonsurans TESG_06981 I 0.000
TRV_07383 Trichophyton verrucosum TRV_07383 I 0.000
YALI0_D23045g Yarrowia lipolytica YALI0_D23045g I 0.000
Mycgr3G100243 Zymoseptoria tritici Mycgr3G100243 N 0.000
Mycgr3G66114 Zymoseptoria tritici Mycgr3G66114 N 0.000