Eucgr.F01204 (Eucalyptus grandis)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Eucgr.F01204 T344800_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP4
M02501_2.00 		Arabidopsis thaliana
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH8084 		0.952 0.454
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.950 0.447
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.950 0.447
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.950 0.447
TCP4
M02514_2.00 		Arabidopsis lyrata
BKGGGACCAC
GTGGTCCCMV		 PBM
Weirauch et al.(2014)
pTH9313 		0.949 0.447
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.946 0.468
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.900 0.383
TCP2
M02503_2.00 		Arabidopsis thaliana
NBGGKMCCVN
NBGGKMCCVN		 PBM
Weirauch et al.(2014)
pTH8198 		0.891 0.369
TCP2
M02508_2.00 		Arabidopsis lyrata
GGSMCCAC
GTGGKSCC		 PBM
Weirauch et al.(2014)
pTH9231 		0.891 0.369
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.873 0.333
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.847 0.355
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.841 0.291
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.839 0.319
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.839 0.319
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Eucgr.F01204.1 TCP 41 184

Links

Other TCP family TFs
Other Eucalyptus grandis TFs

419 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MLOC_12832 Hordeum vulgare MLOC_12832 N
LPERR08G12910 Leersia perrieri LPERR08G12910 I
LPERR09G06880 Leersia perrieri LPERR09G06880 I
GSMUA_Achr6G30610_001 Musa acuminata GSMUA_Achr6G30610_001 I
GSMUA_Achr7G07280_001 Musa acuminata GSMUA_Achr7G07280_001 I
OBART08G15650 Oryza barthii OBART08G15650 I
ORGLA08G0137400 Oryza glaberrima ORGLA08G0137400 I
OGLUM08G16400 Oryza glumaepatula OGLUM08G16400 I
BGIOSGA029777 Oryza indica BGIOSGA029777 I
BGIOSGA026937 Oryza indica BGIOSGA026937 I
OLONG_011765 Oryza longistaminata OLONG_011765 N
OMERI08G12930 Oryza meridionalis OMERI08G12930 I
OMERI09G07780 Oryza meridionalis OMERI09G07780 I
ONIVA08G16750 Oryza nivara ONIVA08G16750 I
ONIVA09G09550 Oryza nivara ONIVA09G09550 I
OPUNC08G13730 Oryza punctata OPUNC08G13730 I
ORUFI08G17560 Oryza rufipogon ORUFI08G17560 I
ORUFI09G10670 Oryza rufipogon ORUFI09G10670 I
OS08G0432800 Oryza sativa OS08G0432800 I
OS09G0410700 Oryza sativa OS09G0410700 I
Pavir.Ba01821 Panicum virgatum Pavir.Ba01821 N
Pavir.Bb02155 Panicum virgatum Pavir.Bb02155 N
Si013911m.g Setaria italica Si013911m.g I
Si030496m.g Setaria italica Si030496m.g N
Sb02g024460 Sorghum bicolor Sb02g024460 N
Sb07g021170 Sorghum bicolor Sb07g021170 I
Traes_5BL_CF90A7CAE Triticum aestivum Traes_5BL_CF90A7CAE N
GRMZM2G526668 Zea mays GRMZM2G526668 I
GRMZM2G176141 Zea mays GRMZM2G176141 N
GRMZM2G107276 Zea mays GRMZM2G107276 I