CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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evm.TU.supercontig_65.19
(
Carica papaya
)
TCP
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03634 (TCP)
IPR005333
evm.TU.supercontig_65.19
T344825_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
evm.model.supercontig_65.19
TCP
9
84
SRRRDRHTRVEDRGHFVTLPAECADRIFRLTGELGLQSHGQTVEWLLRQGLAARFAMPVSFASNQTPSGAAPAVAP
Links
Other
TCP
family TFs
Other
Carica papaya
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
evm.TU.supercontig_65.18
Carica papaya
evm.TU.supercontig_65.18
N
0.983
evm.TU.supercontig_65.20
Carica papaya
evm.TU.supercontig_65.20
I
0.831
GSMUA_Achr5G25030_001
Musa acuminata
GSMUA_Achr5G25030_001
I
0.824
GSMUA_Achr8G12010_001
Musa acuminata
GSMUA_Achr8G12010_001
I
0.830
SELMODRAFT_404061
Selaginella moellendorffii
SELMODRAFT_404061
I
0.827