MDP0000594000 (Malus domestica)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 MDP0000594000 T344954_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.916 0.468
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.909 0.477
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.909 0.477
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.903 0.459
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.903 0.459
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.893 0.459
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.890 0.459
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.843 0.385
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.825 0.367
TCP3
M02500_2.00 		Arabidopsis thaliana
NDGGMCCACN
NGTGGKCCHN		 PBM
Weirauch et al.(2014)
pTH8835 		0.823 0.385
TCP3
M07274_2.00 		Arabidopsis thaliana
DHNGGGACCACH
DGTGGTCCCNDH		 Dap-seq
OMalley et al.(2016)
TCP3_colamp_a 		0.823 0.385
TCP3
M07275_2.00 		Arabidopsis thaliana
DNBGGGACCACHN
NDGTGGTCCCVNH		 Dap-seq
OMalley et al.(2016)
TCP3_col 		0.823 0.385
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000594000 TCP 60 168

Links

Other TCP family TFs
Other Malus domestica TFs

233 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGOS_ABR058C Ashbya gossypii AGOS_ABR058C I
Ecym_4579 Eremothecium cymbalariae Ecym_4579 I
KAFR_0A02150 Kazachstania africana KAFR_0A02150 I
KNAG_0M02140 Kazachstania naganishii KNAG_0M02140 I
KLLA0_E07767g Kluyveromyces lactis KLLA0_E07767g I
KLTH0D07964g Kluyveromyces thermotolerans KLTH0D07964g I
Kwal_8219 Kluyveromyces waltii Kwal_8219 I
PAS_chr3_0923 Komagataella pastoris PAS_chr3_0923 I
SAKL0D13530g Lachancea kluyveri SAKL0D13530g I
LALA0_S02e00540g Lachancea lanzarotensis LALA0_S02e00540g I
KLTH0D07964g Lachancea thermotolerans KLTH0D07964g I
NCAS_0A03700 Naumovozyma castellii NCAS_0A03700 I
NDAI_0C06080 Naumovozyma dairenensis NDAI_0C06080 I
XP_002493160.1 Pichia pastoris XP_002493160.1 I
SU7_2507 Saccharomyces arboricola SU7_2507 I
17660_YMR021C Saccharomyces bayanus 17660_YMR021C I
Scas_Contig576.5 Saccharomyces castellii Scas_Contig576.5 I
16490_YMR021C Saccharomyces mikatae 16490_YMR021C I
17243_Multiple Saccharomyces paradoxus 17243_Multiple I
AACERI_AaceriABR058C Saccharomycetaceae sp ashbya aceri AACERI_AaceriABR058C I
TPHA_0I02450 Tetrapisispora phaffii TPHA_0I02450 I
TDEL_0B06560 Torulaspora delbrueckii TDEL_0B06560 I
Kpol_1056p6 Vanderwaltozyma polyspora Kpol_1056p6 I
ZYRO0E06336g Zygosaccharomyces rouxii ZYRO0E06336g I