SapurV1A.0546s0080 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.0546s0080 T345054_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.936 0.488
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.936 0.473
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.918 0.426
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.909 0.442
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.909 0.442
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.898 0.426
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.898 0.426
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.850 0.333
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.838 0.326
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.0546s0080.1.p TCP 53 210
SapurV1A.0546s0080.2.p TCP 53 210

Links

Other TCP family TFs
Other Salix purpurea TFs

275 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Traes_1DL_0CDB6989D Triticum aestivum Traes_1DL_0CDB6989D N
TRAES3BF181700010CFD_g Triticum aestivum TRAES3BF181700010CFD_g N
Traes_3DS_31B0043F6 Triticum aestivum Traes_3DS_31B0043F6 N
Traes_5AL_DB9E0AA8D Triticum aestivum Traes_5AL_DB9E0AA8D N
Traes_5DL_A9969D596 Triticum aestivum Traes_5DL_A9969D596 N
Traes_6AS_073DEE100 Triticum aestivum Traes_6AS_073DEE100 N
Traes_6AS_0A4ECA583 Triticum aestivum Traes_6AS_0A4ECA583 N
Traes_6AS_E6F39D946 Triticum aestivum Traes_6AS_E6F39D946 N
Traes_6BL_A62A29F7B Triticum aestivum Traes_6BL_A62A29F7B N
Traes_6BS_276ACF176 Triticum aestivum Traes_6BS_276ACF176 N
Traes_6BS_945FD8DAC1 Triticum aestivum Traes_6BS_945FD8DAC1 N
Traes_6BS_9FAF15CD0 Triticum aestivum Traes_6BS_9FAF15CD0 N
Traes_6BS_B8A0BF56F Triticum aestivum Traes_6BS_B8A0BF56F N
Traes_6DS_E67EB0CBE Triticum aestivum Traes_6DS_E67EB0CBE N
Traes_7AS_C6D54DA2D Triticum aestivum Traes_7AS_C6D54DA2D N
Traes_7DS_6B1F6F5E5 Triticum aestivum Traes_7DS_6B1F6F5E5 N