SapurV1A.2245s0020 (Salix purpurea)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 SapurV1A.2245s0020 T345067_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP5
M02510_2.00 		Arabidopsis lyrata
GGGACCAC
GTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9233 		0.936 0.488
TCP5
M02505_2.00 		Arabidopsis thaliana
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH7523 		0.936 0.473
PK10344.1
M01313_2.00 		Cannabis sativa
GGGACCAC
GTGGTCCC		 PBM
Lambert et al.(2019)
pTH11464 		0.918 0.426
TCP17
M07290_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP17_col_a 		0.909 0.442
TCP17
M07291_2.00 		Arabidopsis thaliana
RTGGGGACCAC
GTGGTCCCCAY		 Dap-seq
OMalley et al.(2016)
TCP17_colamp_a 		0.909 0.442
TCP13
M07283_2.00 		Arabidopsis thaliana
GTGGGGACCACWD
HWGTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
PTF1_col_a 		0.898 0.426
TCP13
M07284_2.00 		Arabidopsis thaliana
NNBGGGACCACHN
NDGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
PTF1_colamp_a 		0.898 0.426
LjT20A21.20.nc
M02519_2.00 		Lotus japonicus
GGGACCAY
RTGGTCCC		 PBM
Weirauch et al.(2014)
pTH9202 		0.850 0.333
OS01G0213800
M11398_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$PCF5_01 		0.838 0.326
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SapurV1A.2245s0020.1.p TCP 53 210

Links

Other TCP family TFs
Other Salix purpurea TFs

274 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nAv.1.0.1.g06563 Acanthocheilonema viteae nAv.1.0.1.g06563 N
ACAC_0000390701 Angiostrongylus cantonensis ACAC_0000390701 I
ASIM_0000067201 Anisakis simplex ASIM_0000067201 N
ASU_01158 Ascaris suum ASU_01158 N
Bm2735 Brugia malayi Bm2735 N
CBN13062 Caenorhabditis brenneri CBN13062 N
CBG02112 Caenorhabditis briggsae CBG02112 N
hlh-15 Caenorhabditis elegans WBGene00001959 N
CJA03864 Caenorhabditis japonica CJA03864 N
nDi.2.2.2.g01604 Dirofilaria immitis nDi.2.2.2.g01604 N
DME_0000232301 Dracunculus medinensis DME_0000232301 N
EEL_0000426601 Elaeophora elaphi EEL_0000426601 N
HPLM_0001523301 Haemonchus placei HPLM_0001523301 N
HPBE_0000907401 Heligmosomoides bakeri HPBE_0000907401 I
LOAG_02658 Loa loa LOAG_02658 N
OFLC_0001357601 Onchocerca flexuosa OFLC_0001357601 N
PTRK_0001259000 Parastrongyloides trichosuri PTRK_0001259000 N
scaffold4-EXSNAP2012.68 Pristionchus exspectatus scaffold4-EXSNAP2012.68 N
Ppa-hlh-15 Pristionchus pacificus PPA18782 N
RSKR_0000319400 Rhabditophanes kr3021 RSKR_0000319400 N
L893_g21201 Steinernema glaseri L893_g21201 N
L892_g21855 Steinernema scapterisci L892_g21855 N
SPAL_0000999700 Strongyloides papillosus SPAL_0000999700 N
SSTP_0000772800 Strongyloides stercoralis SSTP_0000772800 N
SVE_1855700 Strongyloides venezuelensis SVE_1855700 N
TCNE_0000157901 Toxocara canis TCNE_0000157901 N
WUBG_01613 Wuchereria bancrofti WUBG_01613 N