Thhalv10018773m.g (Eutrema salsugineum)
TCP

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03634 (TCP) IPR005333 Thhalv10018773m.g T345090_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCP24
M02499_2.00 		Arabidopsis thaliana
NNNNRVMCVV
BBGKBYNNNN		 PBM
Weirauch et al.(2014)
pTH7337 		0.917 0.346
TCP24
M07272_2.00 		Arabidopsis thaliana
GTGGGGACCAC
GTGGTCCCCAC		 Dap-seq
OMalley et al.(2016)
TCP24_colamp_a 		0.917 0.346
TCP24
M07273_2.00 		Arabidopsis thaliana
NNBGGGACCACH
DGTGGTCCCVNN		 Dap-seq
OMalley et al.(2016)
TCP24_col 		0.917 0.346
TCP24
M02506_2.00 		Arabidopsis lyrata
NBKKNNMMVN
NBKKNNMMVN		 PBM
Weirauch et al.(2014)
pTH9227 		0.915 0.353
For this family, TFs with SR scores > 0.822 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10018773m TCP 106 179
Thhalv10018773m TCP 174 233

Links

Other TCP family TFs
Other Eutrema salsugineum TFs

31 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CFIO01_07145 Colletotrichum fioriniae CFIO01_07145 N
CH063_02132 Colletotrichum higginsianum CH063_02132 N
Cob_02860 Colletotrichum orbiculare Cob_02860 N
Z517_03305 Fonsecaea pedrosoi Z517_03305 N
FFUJ_06535 Fusarium fujikuroi FFUJ_06535 N
FGRRES_08135 Fusarium graminearum FGRRES_08135 N
FPSE_05458 Fusarium pseudograminearum FPSE_05458 N
NechaG77217 Fusarium solani NechaG77217 N
FVEG_01650 Fusarium verticillioides FVEG_01650 N
GGTG_09579 Gaeumannomyces graminis GGTG_09579 N
MAPG_02614 Magnaporthe poae MAPG_02614 N
fgenesh1_pg.sca_44_chr3_2_0000044 Nectria haematococca fgenesh1_pg.sca_44_chr3_2_0000044 N
Z518_06775 Rhinocladiella mackenziei Z518_06775 N
SBOR_4351 Sclerotinia borealis SBOR_4351 N
VHEMI10681 Torrubiella hemipterigena VHEMI10681 N