GSPATT00029242001 (Paramecium tetraurelia)
TCR/CxC

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03638 (TCR) IPR005172 GSPATT00029242001 T345487_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TCX3
M01087_2.00 		Arabidopsis thaliana
NNDTTYAAAH
DTTTRAAHNN		 PBM
Sullivan et al.(2014)
pTH7218 		0.672 0.579
TCX3
M02522_2.00 		Arabidopsis thaliana
WTTYAAAH
DTTTRAAW		 PBM
Weirauch et al.(2014)
pTH7421 		0.672 0.579
AT5G25790
M01319_2.00 		Arabidopsis thaliana
NHYRAAHN
NDTTYRDN		 PBM
Lambert et al.(2019)
pTH11533 		0.672 0.579
TCX3
M07297_2.00 		Arabidopsis thaliana
DWTTYRAAWTTBAAW
WTTVAAATTYRAAWH		 Dap-seq
OMalley et al.(2016)
SOL1_colamp_a 		0.672 0.579
TCX3
M07298_2.00 		Arabidopsis thaliana
WTWWAAAATTYAAAW
WTTTRAATTTTWWAW		 Dap-seq
OMalley et al.(2016)
SOL1_col 		0.672 0.579
TCX4
M02521_2.00 		Arabidopsis thaliana
DWTTYRAAWH
DWTTYRAAWH		 PBM
Weirauch et al.(2014)
pTH7573 		0.672 0.566
PK22848.1
M02532_2.00 		Cannabis sativa
NNNYNAAATTTNN
NNAAATTTNRNNN		 PBM
Weirauch et al.(2014)
pTH9724 		0.672 0.566
TCX2
M07300_2.00 		Arabidopsis thaliana
WWTYVAAATTYRAAW
WTTYRAATTTBRAWW		 Dap-seq
OMalley et al.(2016)
TCX2_col_a 		0.672 0.566
TCX2
M07301_2.00 		Arabidopsis thaliana
TTYVAAATTYRAAW
WTTYRAATTTBRAA		 Dap-seq
OMalley et al.(2016)
TCX2_colamp_a 		0.672 0.566
AT2G20110
M02520_2.00 		Arabidopsis thaliana
DTTTAAAH
DTTTAAAH		 PBM
Weirauch et al.(2014)
pTH7914 		0.672 0.553
TCX5
M02523_2.00 		Arabidopsis thaliana
NRTTCAAAYN
NRTTTGAAYN		 PBM
Weirauch et al.(2014)
pTH8164 		0.672 0.553
BRADI1G55710
M02525_2.00 		Brachypodium distachyon
NVTBYRVABN
NVTBYRVABN		 PBM
Weirauch et al.(2014)
pTH9241 		0.672 0.553
fgenesh1_pg.C_Chr_09.0001000301
M02533_2.00 		Ostreococcus tauri
NNNNNRHNN
NNDYNNNNN		 PBM
Weirauch et al.(2014)
pTH9457 		0.672 0.553
AT2G20110
M07295_2.00 		Arabidopsis thaliana
WWHWAADATTYAAAW
WTTTRAATHTTWDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_col_a 		0.672 0.553
AT2G20110
M07296_2.00 		Arabidopsis thaliana
WWHNAAATTYAAAHN
NDTTTRAATTTNDWW		 Dap-seq
OMalley et al.(2016)
AT2G20110_colamp_a 		0.672 0.553
TSO1
M07299_2.00 		Arabidopsis thaliana
WWWTWDAAATTYAAA
TTTRAATTTHWAWWW		 Dap-seq
OMalley et al.(2016)
TSO1_col_a 		0.672 0.553
lin54
M02526_2.00 		Danio rerio
NHTYRAAH
DTTYRADN		 PBM
Weirauch et al.(2014)
pTH8399 		0.672 0.539
SPU_025306
M02531_2.00 		Strongylocentrotus purpuratus
NNNNWYRAAH
DTTYRWNNNN		 PBM
Weirauch et al.(2014)
pTH9286 		0.672 0.539
fgeneshCV_pg.C_scaffold_18000164
M02534_2.00 		Chlorella vulgaris
NNNNDYRAAH
DTTYRHNNNN		 PBM
Weirauch et al.(2014)
pTH9252 		0.672 0.539
BGIBMGA008956
M02524_2.00 		Bombyx mori
AATTTAAAW
WTTTAAATT		 PBM
Weirauch et al.(2014)
pTH9238 		0.672 0.526
LIN54
M02527_2.00 		Gallus gallus
NRTTYAAAH
DTTTRAAYN		 PBM
Weirauch et al.(2014)
pTH8566 		0.672 0.526
NEMVEDRAFT_v1g111410
M01320_2.00 		Nematostella vectensis
NNNNYRWRN
NYWYRNNNN		 PBM
Lambert et al.(2019)
pTH9771 		0.672 0.526
XP_002124866.1
M01321_2.00 		Ciona intestinalis
NDTTYRAAN
NTTYRAAHN		 PBM
Lambert et al.(2019)
pTH9835 		0.672 0.526
ENSTSYG00000005291
M02528_2.00 		Tarsius syrichta
NNWDHDHWNN
NNWDHDHWNN		 PBM
Weirauch et al.(2014)
pTH9366 		0.672 0.513
GE12548
M02529_2.00 		Drosophila yakuba
DTTYAAAY
RTTTRAAH		 PBM
Weirauch et al.(2014)
pTH9262 		0.672 0.500
GSPATT00010696001
M02530_2.00 		Paramecium tetraurelia
NNBRAAHN
NDTTYVNN		 PBM
Weirauch et al.(2014)
pTH8720 		0.672 0.500
PK27683.1
M01322_2.00 		Cannabis sativa
NDTTYAAAH
DTTTRAAHN		 PBM
Lambert et al.(2019)
pTH11347 		0.672 0.461
gw1.20.00.89.1
M02535_2.00 		Ostreococcus tauri
WNYWBVWRNW
WNYWBVWRNW		 PBM
Weirauch et al.(2014)
pTH9647 		0.672 0.461
For this family, TFs with SR scores > 0.660 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CAK58206 TCR/CxC 39 76
CAK58206 TCR/CxC 97 134

Links

Other TCR/CxC family TFs
Other Paramecium tetraurelia TFs

1213 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000019338 Ailuropoda melanoleuca ENSAMEG00000019338 N
ENSAPLG00000016167 Anas platyrhynchos ENSAPLG00000016167 N
Afo_R009830 Aptenodytes forsteri Afo_R009830 N
ENSP00000317614-D1 Bos grunniens ENSP00000317614-D1 N
ENSBTAG00000039871 Bos taurus ENSBTAG00000039871 N
Brh_R003491 Buceros rhinoceros Brh_R003491 N
ZNF518B Callithrix jacchus ENSCJAG00000022790 N
Aan_R008583 Calypte anna Aan_R008583 N
ZNF518B Canis familiaris ENSCAFG00000015463 N
ZNF518B Cavia porcellus ENSCPOG00000026360 N
Cmyd_10009688 Chelonia mydas Cmyd_10009688 N
ENSCSAG00000019700 Chlorocebus sabaeus ENSCSAG00000019700 N
ZNF518B Choloepus hoffmanni ENSCHOG00000010179 N
ZNF518B Dasypus novemcinctus ENSDNOG00000038140 N
ZNF518B Echinops telfairi ENSETEG00000014384 N
ZNF518B Erinaceus europaeus ENSEEUG00000015023 N
ZNF518B Felis catus ENSFCAG00000030856 N
ENSFALG00000014741 Ficedula albicollis ENSFALG00000014741 N
ZNF518B Gallus gallus ENSGALG00000014954 N
Gfo_R010300 Geospiza fortis Gfo_R010300 N
ZNF518B Gorilla gorilla ENSGGOG00000003355 N
ZNF518B Homo sapiens ENSG00000178163 N
ZNF518B Loxodonta africana ENSLAFG00000013802 N
ENSP00000317614 Macaca fascicularis ENSP00000317614 N
ZNF518B Macaca mulatta ENSMMUG00000017761 N
ENSMEUG00000013185 Macropus eugenii ENSMEUG00000013185 N
ZNF518B Meleagris gallopavo ENSMGAG00000012687 N
ENSMICG00000005284 Microcebus murinus ENSMICG00000005284 N
ENSMPUG00000019802 Mustela putorius furo ENSMPUG00000019802 N
Zfp518b Mus musculus ENSMUSG00000046572 N
ZNF518B Myotis lucifugus ENSMLUG00000012789 N
ENSNLEG00000016204 Nomascus leucogenys ENSNLEG00000016204 N
Ogr09561 Ophisaurus gracilis Ogr09561 N
ZNF518B Ornithorhynchus anatinus ENSOANG00000013888 N
ZNF518B Oryctolagus cuniculus ENSOCUG00000003326 N
ZNF518B Otolemur garnettii ENSOGAG00000029956 N
ZNF518B Pan troglodytes ENSPTRG00000015917 N
ENSPANG00000002997 Papio anubis ENSPANG00000002997 N
ENSPSIG00000013251 Pelodiscus sinensis ENSPSIG00000013251 N
ZNF518B Procavia capensis ENSPCAG00000013765 N
ZNF518B Pteropus vampyrus ENSPVAG00000003696 N
Zfp518b Rattus norvegicus ENSRNOG00000028534 N
ZNF518B Sus scrofa ENSSSCG00000029711 N
ZNF518B Taeniopygia guttata ENSTGUG00000009873 N
Tal_R010480 Tyto alba Tal_R010480 N
ZNF518B Vicugna pacos ENSVPAG00000001202 N