CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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NCAS_0A13540
(
Naumovozyma castellii
)
VHR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04001 (Vhr1)
IPR007147
NCAS_0A13540
T350430_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
VHR1
M08640_2.00
Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA
Misc
DeBoer et al.(2011)
YIL056W_1325
0.780
0.780
VHR2
M00917_2.00
Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN
PBM
Gordan et al.(2011)
Vhr2
0.736
0.736
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CCC67912
VHR1
17
107
LSMGTTHRIRALLNFTDEVKWKQFSSRRLELIDKFKLSEFKASEQDYNIRQIAAILRTEFGYPVHYTHEFEKLVTAAVQSVRRNRKRSLRR
Links
Other
VHR1
family TFs
Other
Naumovozyma castellii
TFs
35 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGOS_ADL067C
Ashbya gossypii
AGOS_ADL067C
I
0.769
CAGL0J03014g
Candida glabrata
CAGL0J03014g
I
0.725
Ecym_4329
Eremothecium cymbalariae
Ecym_4329
I
0.780
KAFR_0I01770
Kazachstania africana
KAFR_0I01770
I
0.736
KAFR_0L00930
Kazachstania africana
KAFR_0L00930
I
0.725
KNAG_0L01530
Kazachstania naganishii
KNAG_0L01530
I
0.736
KLLA0_C08151g
Kluyveromyces lactis
KLLA0_C08151g
I
0.780
KLTH0A04444g
Kluyveromyces thermotolerans
KLTH0A04444g
I
0.758
Kwal_5842
Kluyveromyces waltii
Kwal_5842
I
0.714
SAKL0F08734g
Lachancea kluyveri
SAKL0F08734g
I
0.758
LALA0_S01e02388g
Lachancea lanzarotensis
LALA0_S01e02388g
I
0.714
KLTH0A04444g
Lachancea thermotolerans
KLTH0A04444g
I
0.758
NCAS_0E03320
Naumovozyma castellii
NCAS_0E03320
I
0.736
NDAI_0A02490
Naumovozyma dairenensis
NDAI_0A02490
I
0.780
NDAI_0E04810
Naumovozyma dairenensis
NDAI_0E04810
I
0.736
SU7_1620
Saccharomyces arboricola
SU7_1620
I
0.780
7027_YER064C
Saccharomyces bayanus
7027_YER064C
I
0.714
11559_YIL056W
Saccharomyces bayanus
11559_YIL056W
I
0.780
Scas_Contig704.29
Saccharomyces castellii
Scas_Contig704.29
I
1.000
Scas_Contig701.7
Saccharomyces castellii
Scas_Contig701.7
I
0.736
VHR2
Saccharomyces cerevisiae
YER064C
D
0.736
VHR1
Saccharomyces cerevisiae
YIL056W
D
0.780
SKUD_176205
Saccharomyces kudriavzevii
SKUD_176205
I
0.725
6651_YER064C
Saccharomyces mikatae
6651_YER064C
I
0.714
10921_YIL056W
Saccharomyces mikatae
10921_YIL056W
I
0.780
6292_YER064C
Saccharomyces paradoxus
6292_YER064C
I
0.725
11035_YIL056W
Saccharomyces paradoxus
11035_YIL056W
I
0.780
AACERI_AaceriADL067C
Saccharomycetaceae sp ashbya aceri
AACERI_AaceriADL067C
I
0.769
TBLA_0C04650
Tetrapisispora blattae
TBLA_0C04650
I
0.758
TPHA_0J00900
Tetrapisispora phaffii
TPHA_0J00900
I
0.758
TDEL_0H01980
Torulaspora delbrueckii
TDEL_0H01980
I
0.758
Kpol_1066p52
Vanderwaltozyma polyspora
Kpol_1066p52
I
0.747
ZBAI_05302
Zygosaccharomyces bailii
ZBAI_05302
I
0.780
ZBAI_00133
Zygosaccharomyces bailii
ZBAI_00133
I
0.780
ZYRO0C08250g
Zygosaccharomyces rouxii
ZYRO0C08250g
I
0.758