Scas_Contig704.29 (Saccharomyces castellii)
VHR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04001 (Vhr1) IPR007147 Scas_Contig704.29 T350453_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
VHR1
M08640_2.00 		Saccharomyces cerevisiae
TCANNNNNNNNTGATT
AATCANNNNNNNNTGA		 Misc
DeBoer et al.(2011)
YIL056W_1325 		0.780 0.780
VHR2
M00917_2.00 		Saccharomyces cerevisiae
NRTGACTCAN
NTGAGTCAYN		 PBM
Gordan et al.(2011)
Vhr2 		0.736 0.736
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig704.29 VHR1 17 107

Links

Other VHR1 family TFs
Other Saccharomyces castellii TFs

Invalid Input OrderBy

35 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action