CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OMERI06G03280
(
Oryza meridionalis
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08536 (Whirly)
IPR013742
OMERI06G03280
T350531_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OMERI06G03280.1
Whirly
97
232
IYKGKAAMSLDPRPPQFVPLDSGAYKVVKEGFVLLQFAPAVATRQYDWTRKQVFSLSVWEMGSLLTLGPTDSCEFFHDPFKGRSDEGKVRKVLKVEPTPDGNSRFFNLSVQNRLLNIDENIYIPITKGEFAVIVST
Links
Other
Whirly
family TFs
Other
Oryza meridionalis
TFs
55 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
HpaG804023
Hyaloperonospora arabidopsidis
HpaG804023
N
estExt_fgenesh1_kg.C_150123
Phytophthora capsici
estExt_fgenesh1_kg.C_150123
N
PITG_04377
Phytophthora infestans
PITG_04377
N
fgenesh_scip_prom.46568.10438
Phytophthora kernoviae
fgenesh_scip_prom.46568.10438
N
fgenesh_scip_prom.28083.10139
Phytophthora lateralis
fgenesh_scip_prom.28083.10139
N
F443_02900
Phytophthora parasitica
F443_02900
N
Phyra83470
Phytophthora ramorum
Phyra83470
N
Physo133830
Phytophthora sojae
Physo133830
N
maker-par_contig_1609-fgenesh-gene-0.1
Pythium arrhenomanes
maker-par_contig_1609-fgenesh-gene-0.1
N
maker-pve_contig_338-snap-gene-0.20
Pythium vexans
maker-pve_contig_338-snap-gene-0.20
N