CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.013G077400
(
Gossypium raimondii
)
Whirly
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF08536 (Whirly)
IPR013742
Gorai.013G077400
T350633_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.013G077400.10
Whirly
94
189
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKRCSKQTSKRGRKC
Gorai.013G077400.11
Whirly
94
150
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQIKCKI
Gorai.013G077400.12
Whirly
93
149
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQIKCKI
Gorai.013G077400.1
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.2
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.3
Whirly
93
228
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.4
Whirly
93
228
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.5
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.6
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Gorai.013G077400.7
Whirly
94
206
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGNAQF
Gorai.013G077400.8
Whirly
93
207
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLVHFAISF
Gorai.013G077400.9
Whirly
94
229
IYKGKAALTVEPRAPEFVPLDSGAFKISREGFVLLQFAPAAGVRQYDWSRKQVFSLSVTEIGTLISLGMRESCEFFHDPFKGKSDEGKVRKVLKVEPLPDGSGHFFNLGVQNKLLNVDENVYIPITRGEFTVLKSA
Links
Other
Whirly
family TFs
Other
Gossypium raimondii
TFs
67 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AGABI2DRAFT_143213
Agaricus bisporus
AGABI2DRAFT_143213
N
M378DRAFT_70504
Amanita muscaria
M378DRAFT_70504
N
BOTBODRAFT_62341
Botryobasidium botryosum
BOTBODRAFT_62341
N
CERSUDRAFT_118233
Ceriporiopsis subvermispora
CERSUDRAFT_118233
N
DICSQDRAFT_163481
Dichomitus squalens
DICSQDRAFT_163481
N
GALMADRAFT_46548
Galerina marginata
GALMADRAFT_46548
N
GLOTRDRAFT_138787
Gloeophyllum trabeum
GLOTRDRAFT_138787
N
M413DRAFT_73437
Hebeloma cylindrosporum
M413DRAFT_73437
N
fgenesh2_pg.C_scaffold_14000115
Heterobasidion annosum
fgenesh2_pg.C_scaffold_14000115
N
HETIRDRAFT_431082
Heterobasidion irregulare
HETIRDRAFT_431082
N
JAAARDRAFT_196106
Jaapia argillacea
JAAARDRAFT_196106
N
K443DRAFT_671746
Laccaria amethystina
K443DRAFT_671746
N
LACBIDRAFT_296378
Laccaria bicolor
LACBIDRAFT_296378
N
Moror_17790
Moniliophthora roreri
Moror_17790
N
PAXINDRAFT_99404
Paxillus involutus
PAXINDRAFT_99404
N
PAXRUDRAFT_827663
Paxillus rubicundulus
PAXRUDRAFT_827663
N
PHACADRAFT_260024
Phanerochaete carnosa
PHACADRAFT_260024
N
fgenesh1_pg.C_scaffold_4000408
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_4000408
N
PHLGIDRAFT_365607
Phlebiopsis gigantea
PHLGIDRAFT_365607
N
PILCRDRAFT_820497
Piloderma croceum
PILCRDRAFT_820497
N
PIIN_06096
Piriformospora indica
PIIN_06096
N
PISMIDRAFT_102688
Pisolithus microcarpus
PISMIDRAFT_102688
N
PLEOSDRAFT_1112913
Pleurotus ostreatus
PLEOSDRAFT_1112913
N
SCHCODRAFT_236086
Schizophyllum commune
SCHCODRAFT_236086
N
SCLCIDRAFT_1213805
Scleroderma citrinum
SCLCIDRAFT_1213805
N
SERLA73DRAFT_159500
Serpula lacrymans
SERLA73DRAFT_159500
N
CY34DRAFT_811362
Suillus luteus
CY34DRAFT_811362
N
BN946_scf184985.g64
Trametes cinnabarina
BN946_scf184985.g64
N