CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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OGLUM06G07170
(
Oryza glumaepatula
)
WRC
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF08879 (WRC)
IPR014977
OGLUM06G07170
T351027_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
AT2G42040
M01088_2.00
Arabidopsis thaliana
NBTRCACYNN
NNRGTGYAVN
PBM
Sullivan et al.(2014)
pTH7503
0.786
0.786
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
OGLUM06G07170.1
WRC
154
195
MEGSRCSRVNGRGWRCSQPTLVGYALCEHHLGKGRMRSVTGG
Links
Other
WRC
family TFs
Other
Oryza glumaepatula
TFs
96 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Lus10024006.g
Linum usitatissimum
Lus10024006.g
N
MDP0000267678
Malus domestica
MDP0000267678
N
MDP0000307020
Malus domestica
MDP0000307020
N
Pm000962
Prunus mume
Pm000962
N
Pm008951
Prunus mume
Pm008951
N
PRUPE_ppa023103mg
Prunus persica
PRUPE_ppa023103mg
N
PRUPE_ppb020756mg
Prunus persica
PRUPE_ppb020756mg
N