WRKY62 (Oryza indica)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03106 (WRKY) IPR003657 BGIOSGA029757 T352045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.858 0.831
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.858 0.831
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.858 0.831
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.858 0.831
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.856 0.814
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.854 0.847
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.854 0.847
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.854 0.847
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.854 0.847
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.854 0.847
WRKY6
M07377_2.00 		Arabidopsis thaliana
DNNNHNDHNHNRGTCAACG
CGTTGACYNDNDHNDNNNH		 Dap-seq
OMalley et al.(2016)
WRKY6_col_a 		0.813 0.661
WRKY6
M07378_2.00 		Arabidopsis thaliana
NNHNWRGTCAACKNH
DNMGTTGACYWNDNN		 Dap-seq
OMalley et al.(2016)
WRKY6_colamp_a 		0.813 0.661
WRKY31
M07408_2.00 		Arabidopsis thaliana
NNNNHNNNNNDRGTCAACG
CGTTGACYHNNNNNDNNNN		 Dap-seq
OMalley et al.(2016)
WRKY31_col_a 		0.811 0.661
WRKY31
M07409_2.00 		Arabidopsis thaliana
NHWRGTCAACKNH
DNMGTTGACYWDN		 Dap-seq
OMalley et al.(2016)
WRKY31_colamp_a 		0.811 0.661
WRKY42
M07404_2.00 		Arabidopsis thaliana
NDWRGTCAACDNNNNDNNHNN
NNDNNHNNNNHGTTGACYWHN		 Dap-seq
OMalley et al.(2016)
WRKY42_col_a 		0.809 0.644
WRKY42
M07405_2.00 		Arabidopsis thaliana
HNDNNNWRGTCAACKNHNDD
HHNDNMGTTGACYWNNNHND		 Dap-seq
OMalley et al.(2016)
WRKY42_colamp_a 		0.809 0.644
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA029757-PA WRKY 144 202

Links

Other WRKY family TFs
Other Oryza indica TFs

716 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGABI2DRAFT_191870 Agaricus bisporus AGABI2DRAFT_191870 N
BOTBODRAFT_92498 Botryobasidium botryosum BOTBODRAFT_92498 I
CERSUDRAFT_80362 Ceriporiopsis subvermispora CERSUDRAFT_80362 N
CC1G_14628 Coprinopsis cinerea CC1G_14628 N
L804_02024 Cryptococcus gattii L804_02024 N
CNA04400 Cryptococcus neoformans CNA04400 N
H072_4770 Dactylellina haptotyla H072_4770 N
DICSQDRAFT_61110 Dichomitus squalens DICSQDRAFT_61110 N
DRE_04511 Drechslerella stenobrocha DRE_04511 N
FOMPIDRAFT_1062771 Fomitopsis pinicola FOMPIDRAFT_1062771 N
GALMADRAFT_133154 Galerina marginata GALMADRAFT_133154 N
GLOTRDRAFT_136174 Gloeophyllum trabeum GLOTRDRAFT_136174 N
M413DRAFT_441255 Hebeloma cylindrosporum M413DRAFT_441255 N
estExt_fgenesh3_kg.C_40166 Heterobasidion annosum estExt_fgenesh3_kg.C_40166 N
HETIRDRAFT_313274 Heterobasidion irregulare HETIRDRAFT_313274 N
JAAARDRAFT_145306 Jaapia argillacea JAAARDRAFT_145306 N
K443DRAFT_88561 Laccaria amethystina K443DRAFT_88561 N
LACBIDRAFT_311793 Laccaria bicolor LACBIDRAFT_311793 N
MVLG_01921 Microbotryum violaceum MVLG_01921 N
Moror_7350 Moniliophthora roreri Moror_7350 N
PAXRUDRAFT_831153 Paxillus rubicundulus PAXRUDRAFT_831153 N
PHACADRAFT_249271 Phanerochaete carnosa PHACADRAFT_249271 N
PHLGIDRAFT_221070 Phlebiopsis gigantea PHLGIDRAFT_221070 N
PILCRDRAFT_148646 Piloderma croceum PILCRDRAFT_148646 N
PIIN_03898 Piriformospora indica PIIN_03898 N
PISMIDRAFT_670789 Pisolithus microcarpus PISMIDRAFT_670789 N
PLEOSDRAFT_1092752 Pleurotus ostreatus PLEOSDRAFT_1092752 N
POSPLDRAFT_96125 Postia placenta POSPLDRAFT_96125 N
RHTO_03592 Rhodosporidium toruloides RHTO_03592 N
RTG_00886 Rhodotorula glutinis RTG_00886 N
SCHCODRAFT_254923 Schizophyllum commune SCHCODRAFT_254923 N
SCLCIDRAFT_138221 Scleroderma citrinum SCLCIDRAFT_138221 N
SERLA73DRAFT_177482 Serpula lacrymans SERLA73DRAFT_177482 N
CY34DRAFT_797697 Suillus luteus CY34DRAFT_797697 N
BN946_scf184858.g52 Trametes cinnabarina BN946_scf184858.g52 N
fgeneshTM_pg.1_#_1400 Tremella mesenterica fgeneshTM_pg.1_#_1400 N
A1Q1_03604 Trichosporon asahii A1Q1_03604 N