CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Bra020197
(
Brassica rapa
)
WRKY
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF03106 (WRKY)
IPR003657
Bra020197
T352299_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
WRKY38
M00901_2.00
Arabidopsis thaliana
NNRGTCAACBN
NVGTTGACYNN
PBM
Franco-Zorrilla et al.(2014)
WRKY38
0.861
0.864
WRKY62
M02561_2.00
Arabidopsis thaliana
TRGTCAAM
KTTGACYA
PBM
Weirauch et al.(2014)
pTH8246
0.835
0.644
WRKY63
M02546_2.00
Arabidopsis thaliana
NGGTCAAN
NTTGACCN
PBM
Weirauch et al.(2014)
pTH8182
0.832
0.661
For this family, TFs with SR scores >
0.808
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Bra020197.1-P
WRKY
95
155
YDGFLWRKYGQKTIKQSKHQRSYYRCSYNIDHACGARKHEQKIKDNPPVYRTTYFGHHTCN
Links
Other
WRKY
family TFs
Other
Brassica rapa
TFs
87 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AB05384.1
Alternaria brassicicola
AB05384.1
I
AOL_s00097g585
Arthrobotrys oligospora
AOL_s00097g585
I
ARB_02172
Arthroderma benhamiae
ARB_02172
I
MCYG_00012
Arthroderma otae
MCYG_00012
I
e_gw1.00042.98.1
Aspergillus carbonarius
e_gw1.00042.98.1
I
ACLA_019130
Aspergillus clavatus
CADACLAG00002921
I
CADAFLAG00001090
Aspergillus flavus
CADAFLAG00001090
I
AFUA_1G16460
Aspergillus fumigatus
CADAFUAG00007656
I
ANIA_00951
Aspergillus nidulans
CADANIAG00001701
D
CADANGAG00001076
Aspergillus niger
CADANGAG00001076
I
EURHEDRAFT_512193
Aspergillus ruber
EURHEDRAFT_512193
I
ATEG_05161
Aspergillus terreus
CADATEAG00004745
I
M437DRAFT_37789
Aureobasidium melanogenum
M437DRAFT_37789
I
M438DRAFT_349765
Aureobasidium pullulans
M438DRAFT_349765
I
AUEXF2481DRAFT_6481
Aureobasidium subglaciale
AUEXF2481DRAFT_6481
I
COCC4DRAFT_52892
Bipolaris maydis
COCC4DRAFT_52892
I
COCMIDRAFT_22848
Bipolaris oryzae
COCMIDRAFT_22848
I
COCSADRAFT_34697
Bipolaris sorokiniana
COCSADRAFT_34697
I
COCVIDRAFT_24689
Bipolaris victoriae
COCVIDRAFT_24689
I
COCCADRAFT_202
Bipolaris zeicola
COCCADRAFT_202
I
BDDG_03512
Blastomyces dermatitidis
BDDG_03512
I
BGHDH14_bgh02790
Blumeria graminis
BGHDH14_bgh02790
I
Bcin03g00750
Botrytis cinerea
Bcin03g00750
I
PVAR5_7895
Byssochlamys spectabilis
PVAR5_7895
I
A1O1_04210
Capronia coronata
A1O1_04210
I
A1O3_01208
Capronia epimyces
A1O3_01208
I
PV04_02419
Capronia semiimmersa
PV04_02419
I
Z519_11346
Cladophialophora bantiana
Z519_11346
I
G647_08748
Cladophialophora carrionii
G647_08748
I
PV07_02787
Cladophialophora immunda
PV07_02787
I
A1O5_10470
Cladophialophora psammophila
A1O5_10470
I
A1O7_02237
Cladophialophora yegresii
A1O7_02237
I
CPUR_06646
Claviceps purpurea
CPUR_06646
I
CIMG_13671
Coccidioides immitis
CIMG_13671
I
CPC735_010880
Coccidioides posadasii
CPC735_010880
I
estExt_fgenesh1_pg.C_80141
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_80141
I
CFIO01_07721
Colletotrichum fioriniae
CFIO01_07721
I
CGGC5_4259
Colletotrichum gloeosporioides
CGGC5_4259
I
GLRG_10296
Colletotrichum graminicola
GLRG_10296
I
Cob_11342
Colletotrichum orbiculare
Cob_11342
I
CSUB01_10111
Colletotrichum sublineola
CSUB01_10111
I
estExt_Genewise1Plus.C_21231
Cryphonectria parasitica
estExt_Genewise1Plus.C_21231
I
L804_00066
Cryptococcus gattii
L804_00066
N
CNJ00670
Cryptococcus neoformans
CNJ00670
N
HMPREF1541_00486
Cyphellophora europaea
HMPREF1541_00486
I
H072_2778
Dactylellina haptotyla
H072_2778
I
DOTSEDRAFT_69470
Dothistroma septosporum
DOTSEDRAFT_69470
N
EV44_g5365
Erysiphe necator
EV44_g5365
I
A1O9_06736
Exophiala aquamarina
A1O9_06736
I
HMPREF1120_08360
Exophiala dermatitidis
HMPREF1120_08360
I
PV10_00861
Exophiala mesophila
PV10_00861
I
PV06_04889
Exophiala oligosperma
PV06_04889
I
PV11_03612
Exophiala sideris
PV11_03612
I
PV08_03184
Exophiala spinifera
PV08_03184
I
PV05_07253
Exophiala xenobiotica
PV05_07253
I
FOMPIDRAFT_73073
Fomitopsis pinicola
FOMPIDRAFT_73073
N
Z517_00401
Fonsecaea pedrosoi
Z517_00401
I
FFUJ_01766
Fusarium fujikuroi
FFUJ_01766
I
FGRRES_01555
Fusarium graminearum
FGRRES_01555
I
FOXG_11153
Fusarium oxysporum
FOXG_11153
I
FPSE_00779
Fusarium pseudograminearum
FPSE_00779
I
NechaG65174
Fusarium solani
NechaG65174
I
FVEG_09636
Fusarium verticillioides
FVEG_09636
I
GGTG_06418
Gaeumannomyces graminis
GGTG_06418
I
M7I_0147
Glarea lozoyensis
M7I_0147
I
CMQ_6538
Grosmannia clavigera
CMQ_6538
I
HCBG_01276
Histoplasma capsulatum
HCBG_01276
I
LEMA_P086810.1
Leptosphaeria maculans
LEMA_P086810.1
I
MPH_10251
Macrophomina phaseolina
MPH_10251
I
MGG_03288
Magnaporthe oryzae
MGG_03288
I
MAPG_04630
Magnaporthe poae
MAPG_04630
I
MBM_01879
Marssonina brunnea
MBM_01879
I
MAM_04081
Metarhizium album
MAM_04081
I
MBR_06810
Metarhizium brunneum
MBR_06810
I
MGU_04555
Metarhizium guizhouense
MGU_04555
I
MAJ_06048
Metarhizium majus
MAJ_06048
I
X797_000031
Metarhizium robertsii
X797_000031
I
MCYG_00012
Microsporum canis
MCYG_00012
I
MGYG_07213
Microsporum gypseum
MGYG_07213
I
fgeneshMC_pg.1_#_1636
Mucor circinelloides
fgeneshMC_pg.1_#_1636
I
fgeneshMC_pg.3_#_28
Mucor circinelloides
fgeneshMC_pg.3_#_28
N
fgeneshMC_pg.4_#_1012
Mucor circinelloides
fgeneshMC_pg.4_#_1012
N
estExt_fgenesh1_pg.C_160018
Mycosphaerella fijiensis
estExt_fgenesh1_pg.C_160018
N
estExt_fgenesh1_pg.C_chr_20607
Mycosphaerella graminicola
estExt_fgenesh1_pg.C_chr_20607
I
estExt_Genewise1Plus.C_sca_8_chr1_1_00454
Nectria haematococca
estExt_Genewise1Plus.C_sca_8_chr1_1_00454
I
NFIA_008980
Neosartorya fischeri
CADNFIAG00001347
I
OIDMADRAFT_183172
Oidiodendron maius
OIDMADRAFT_183172
I
OCS_04625
Ophiocordyceps sinensis
OCS_04625
I
F503_00378
Ophiostoma piceae uamh
F503_00378
I
PABG_06099
Paracoccidioides brasiliensis
PABG_06099
I
PAAG_12580
Paracoccidioides sp lutzii
PAAG_12580
I
Pc21g23040
Penicillium chrysogenum
Pc21g23040
I
PDIP_11330
Penicillium digitatum
PDIP_11330
I
PEX1_102500
Penicillium expansum
PEX1_102500
I
PITC_032250
Penicillium italicum
PITC_032250
I
PMAA_066500
Penicillium marneffei
PMAA_066500
I
PDE_00114
Penicillium oxalicum
PDE_00114
I
PCH_Pc21g23040
Penicillium rubens
PCH_Pc21g23040
I
U727_00433202531
Penicillium solitum
U727_00433202531
I
PFICI_09118
Pestalotiopsis fici
PFICI_09118
I
SNOG_02426
Phaeosphaeria nodorum
SNOG_02426
I
PHACADRAFT_253478
Phanerochaete carnosa
PHACADRAFT_253478
N
fgenesh1_pg.C_scaffold_5000487
Phanerochaete chrysosporium
fgenesh1_pg.C_scaffold_5000487
N
PHLGIDRAFT_33148
Phlebiopsis gigantea
PHLGIDRAFT_33148
N
fgeneshPB_pg.6__11
Phycomyces blakesleeanus
fgeneshPB_pg.6__11
N
PODANS_3_9690
Podospora anserina
PODANS_3_9690
I
MYCFIDRAFT_150893
Pseudocercospora fijiensis
MYCFIDRAFT_150893
N
GMDG_00083
Pseudogymnoascus destructans
GMDG_00083
I
V499_07882
Pseudogymnoascus pannorum
V499_07882
I
PTT_17883
Pyrenophora teres
PTT_17883
I
Z518_01931
Rhinocladiella mackenziei
Z518_01931
I
V565_084030
Rhizoctonia solani
V565_084030
N
RO3G_15999
Rhizopus oryzae
RO3G_15999
N
SAPIO_CDS1137
Scedosporium apiospermum
SAPIO_CDS1137
I
SBOR_3479
Sclerotinia borealis
SBOR_3479
I
SS1G_00829
Sclerotinia sclerotiorum
SS1G_00829
I
SETTUDRAFT_163914
Setosphaeria turcica
SETTUDRAFT_163914
I
SEPMUDRAFT_146995
Sphaerulina musiva
SEPMUDRAFT_146995
N
SPBR_00337
Sporothrix brasiliensis
SPBR_00337
I
HMPREF1624_07934
Sporothrix schenckii
HMPREF1624_07934
I
S40288_02068
Stachybotrys chartarum
S40288_02068
I
S40285_02659
Stachybotrys chlorohalonata
S40285_02659
I
SNOG_02426
Stagonospora nodorum
SNOG_02426
I
PMAA_066500
Talaromyces marneffei
PMAA_066500
I
TSTA_086630
Talaromyces stipitatus
TSTA_086630
I
UCRPA7_8182
Togninia minima
UCRPA7_8182
I
TRIATDRAFT_141284
Trichoderma atroviride
TRIATDRAFT_141284
I
TRIREDRAFT_22532
Trichoderma reesei
TRIREDRAFT_22532
I
TRIVIDRAFT_2765
Trichoderma virens
TRIVIDRAFT_2765
I
TEQG_08786
Trichophyton equinum
TEQG_08786
I
H101_07555
Trichophyton interdigitale
H101_07555
I
H102_00527
Trichophyton rubrum
H102_00527
I
H105_00515
Trichophyton soudanense
H105_00515
I
TRV_00423
Trichophyton verrucosum
TRV_00423
I
GSTUM_00008508001
Tuber melanosporum
GSTUM_00008508001
I
M407DRAFT_17372
Tulasnella calospora
M407DRAFT_17372
N
UREG_02910
Uncinocarpus reesii
UREG_02910
I
UV8b_475
Ustilaginoidea virens
UV8b_475
I
PV09_04179
Verruconis gallopava
PV09_04179
I
VDBG_05782
Verticillium albo atrum
VDBG_05782
I
VDBG_05782
Verticillium alfalfae
VDBG_05782
I
VDAG_07716
Verticillium dahliae
VDAG_07716
I
WALSEDRAFT_59486
Wallemia sebi
WALSEDRAFT_59486
N
Mycgr3G108163
Zymoseptoria tritici
Mycgr3G108163
I