CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

GLYMA18G39970 *(Glycine max)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source	Animal TF db
PF03106 (WRKY)	IPR003657	GLYMA18G39970	T352771_2.00	Ensembl (2018-Dec-8)	Link out
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.839	0.655
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.838	0.690
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.832	0.655
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.832	0.655
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.830	0.655
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.830	0.655
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.830	0.655
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.830	0.638
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.830	0.638
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.830	0.638
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.828	0.655
PK25870.1 M01325_2.00	Cannabis sativa	NRGTCAAM	KTTGACYN	PBM Lambert et al.(2019) pTH10156	0.825	0.603
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.817	0.552
WRKY24 M07426_2.00	Arabidopsis thaliana	NNNAWAGTCAACGN	NCGTTGACTWTNNN	Dap-seq OMalley et al.(2016) WRKY24_col_a	0.816	0.603
WRKY24 M07427_2.00	Arabidopsis thaliana	NAWAGTCAACGNH	DNCGTTGACTWTN	Dap-seq OMalley et al.(2016) WRKY24_colamp_a	0.816	0.603
WRKY12 M00898_2.00	Arabidopsis thaliana	NHGGTCAACNN	NNGTTGACCDN	PBM Franco-Zorrilla et al.(2014) WRKY12	0.813	0.655
WRKY43 M02555_2.00	Arabidopsis thaliana	NRGTCAAHNN	NNDTTGACYN	PBM Weirauch et al.(2014) pTH7373	0.813	0.603
WRKY43 M07393_2.00	Arabidopsis thaliana	NNAAAGTCAACGNN	NNCGTTGACTTTNN	Dap-seq OMalley et al.(2016) WRKY43_col_a	0.813	0.603
WRKY43 M07394_2.00	Arabidopsis thaliana	NNNNAAAGTCAACGN	NCGTTGACTTTNNNN	Dap-seq OMalley et al.(2016) WRKY43_colamp_a	0.813	0.603
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.813	0.586
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.813	0.586
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.813	0.586
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.812	0.569
WRKY45 M00899_2.00	Arabidopsis thaliana	NNRGTCAAMGN	NCKTTGACYNN	PBM Franco-Zorrilla et al.(2014) WRKY45	0.812	0.569
WRKY45 M07397_2.00	Arabidopsis thaliana	NAAAAGTCAAMD	HKTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY45_col_a	0.812	0.569
WRKY45 M07398_2.00	Arabidopsis thaliana	MAAAGTCAAMV	BKTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY45_colamp_a	0.812	0.569
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.812	0.569
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.812	0.569
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.812	0.569
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.811	0.569
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.811	0.569
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.811	0.569
WRKY51 M02568_2.00	Arabidopsis thaliana	NNRGTCAANN	NNTTGACYNN	PBM Weirauch et al.(2014) pTH7478	0.811	0.569
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.811	0.603
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.811	0.603
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.811	0.603
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.808	0.603
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.808	0.603
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.808	0.603
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
GLYMA18G39970.2	WRKY	125	182	DDGYKWRKYGQKSIKNSPNPRSYYRCTNPRCSAKKQVERSNEDPDTLIITYEGLHLHF

Links
Other WRKY family TFs
Other *Glycine max* TFs

1656 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ZSCAN9	Bos taurus	ENSBTAG00000040168	I	0.000
ZSCAN9	Callithrix jacchus	ENSCJAG00000018658	I	0.000
ZSCAN9	Equus caballus	ENSECAG00000015075	I	0.000
ZSCAN9	Gorilla gorilla	ENSGGOG00000000688	I	0.000
ZSCAN9	Homo sapiens	ENSG00000137185	D	0.000
ENSP00000404074	Macaca fascicularis	ENSP00000404074	I	0.000
ZSCAN9	Macaca mulatta	ENSMMUG00000002537	I	0.000
ZSCAN9	Microcebus murinus	ENSMICG00000010443	I	0.000
ZSCAN9	Pan troglodytes	ENSPTRG00000017870	I	0.000
ENSPANG00000013432	Papio anubis	ENSPANG00000013432	I	0.000
ENSPPYG00000029879	Pongo abelii	ENSPPYG00000029879	I	0.000
ZSCAN9	Sus scrofa	ENSSSCG00000001203	I	0.000
ENSTSYG00000006203	Tarsius syrichta	ENSTSYG00000006203	I	0.000
ZSCAN9	Tursiops truncatus	ENSTTRG00000013203	I	0.000

GLYMA18G39970 (Glycine max) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1656 Related TFs

GLYMA18G39970 **(Glycine max)
WRKY**