Cla018303 (Citrullus lanatus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Cla018303 T355310_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY33
M02554_2.00 		Arabidopsis thaliana
NNRGTCHDNN
NNHDGACYNN		 PBM
Weirauch et al.(2014)
pTH8183 		0.875 0.896
WRKY33
M07391_2.00 		Arabidopsis thaliana
HWWAGTCAAMD
HKTTGACTWWD		 Dap-seq
OMalley et al.(2016)
WRKY33_col_a 		0.875 0.896
Q40090_IPOBA
M11466_2.00 		Ipomoea batatas Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$SPF1_Q2 		0.871 0.878
WRKY26
M07418_2.00 		Arabidopsis thaliana
MWAAGTCAACGNH
DNCGTTGACTWWK		 Dap-seq
OMalley et al.(2016)
WRKY26_col_a 		0.868 0.809
WRKY26
M07419_2.00 		Arabidopsis thaliana
HMWAGTCAAMR
YKTTGACTWKD		 Dap-seq
OMalley et al.(2016)
WRKY26_colamp_a 		0.868 0.809
WRKY3
M07381_2.00 		Arabidopsis thaliana
MAWAGTCAAMR
YKTTGACTWTK		 Dap-seq
OMalley et al.(2016)
WRKY3_col_a 		0.857 0.809
PK05432.1
M01324_2.00 		Cannabis sativa
NNRGTCARH
DYTGACYNN		 PBM
Lambert et al.(2019)
pTH11342 		0.857 0.809
WRKY20
M07414_2.00 		Arabidopsis thaliana
HHHRGTCAAMGNH
DNCKTTGACYDDD		 Dap-seq
OMalley et al.(2016)
WRKY20_col_a 		0.855 0.774
WRKY2
M02567_2.00 		Arabidopsis thaliana
BRGTCAAM
KTTGACYV		 PBM
Weirauch et al.(2014)
pTH8832 		0.855 0.791
WRKY25
M02552_2.00 		Arabidopsis thaliana
YRGTCAAM
KTTGACYR		 PBM
Weirauch et al.(2014)
pTH8810 		0.854 0.748
WRKY25
M07387_2.00 		Arabidopsis thaliana
HWWRGTCAAMR
YKTTGACYWWD		 Dap-seq
OMalley et al.(2016)
WRKY25_col_a 		0.854 0.748
WRKY25
M07388_2.00 		Arabidopsis thaliana
NNNHWRGTCAACRNH
DNYGTTGACYWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY25_colamp_a 		0.854 0.748
ZAP1
M02726_2.00 		Arabidopsis thaliana
DRCKCGGTCAA
TTGACCGMGYH		 SELEX
Mathelier et al.(2014)
MA0589.1 		0.827 0.643
ZAP1
M11463_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ZAP1_01 		0.827 0.643
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla018303 WRKY 170 226
Cla018303 WRKY 319 376

Links

Other WRKY family TFs
Other Citrullus lanatus TFs

794 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F775_03006 Aegilops tauschii F775_03006 I 0.000
F775_13221 Aegilops tauschii F775_13221 I 0.000
F775_15336 Aegilops tauschii F775_15336 I 0.000
AMTR_s00033p00241280 Amborella trichopoda AMTR_s00033p00241280 I 0.000
AMTR_s00093p00110710 Amborella trichopoda AMTR_s00093p00110710 I 0.000
AMTR_s00122p00127250 Amborella trichopoda AMTR_s00122p00127250 I 0.000
Aquca_001_00694 Aquilegia coerulea Aquca_001_00694 I 0.000
Aquca_026_00236 Aquilegia coerulea Aquca_026_00236 I 0.000
Al_scaffold_0001_2706 Arabidopsis lyrata Al_scaffold_0001_2706 I 0.000
fgenesh2_kg.2__1124__AT1G68670.1 Arabidopsis lyrata fgenesh2_kg.2__1124__AT1G68670.1 I 0.000
scaffold_500333.1 Arabidopsis lyrata scaffold_500333.1 I 0.000
HHO3 Arabidopsis thaliana AT1G25550 D 0.000
HHO2 Arabidopsis thaliana AT1G68670 D 0.000
EFM Arabidopsis thaliana AT2G03500 D 0.000
Bostr.0556s0172 Boechera stricta Bostr.0556s0172 I 0.000
Bostr.12659s0399 Boechera stricta Bostr.12659s0399 I 0.000
Bostr.26959s0022 Boechera stricta Bostr.26959s0022 I 0.000
BRADI2G04810 Brachypodium distachyon BRADI2G04810 I 0.000
BRADI3G10730 Brachypodium distachyon BRADI3G10730 I 0.000
BRADI4G03160 Brachypodium distachyon BRADI4G03160 I 0.000
Bo2g061130 Brassica oleracea Bo2g061130 I 0.000
Bo2g137000 Brassica oleracea Bo2g137000 I 0.000
Bo6g107160 Brassica oleracea Bo6g107160 I 0.000
Bo7g081380 Brassica oleracea Bo7g081380 I 0.000
Bra004330 Brassica rapa Bra004330 I 0.000
Bra025115 Brassica rapa Bra025115 I 0.000
Bra026548 Brassica rapa Bra026548 I 0.000
Bra038360 Brassica rapa Bra038360 I 0.000
PK20621.1 Cannabis sativa PK20621.1 I 0.000
Cagra.3392s0001 Capsella grandiflora Cagra.3392s0001 I 0.000
Cagra.3545s0007 Capsella grandiflora Cagra.3545s0007 I 0.000
Carubv10009492m.g Capsella rubella Carubv10009492m.g I 0.000
Carubv10017308m.g Capsella rubella Carubv10017308m.g I 0.000
evm.TU.supercontig_1.213 Carica papaya evm.TU.supercontig_1.213 I 0.000
evm.TU.supercontig_127.55 Carica papaya evm.TU.supercontig_127.55 I 0.000
Ca_06627 Cicer arietinum Ca_06627 I 0.000
Cla008104 Citrullus lanatus Cla008104 I 0.000
Cla012503 Citrullus lanatus Cla012503 I 0.000
Cla017007 Citrullus lanatus Cla017007 I 0.000
Ciclev10008096m.g Citrus clementina Ciclev10008096m.g I 0.000
orange1.1g011048m.g Citrus sinensis orange1.1g011048m.g I 0.000
Cucsa.082250 Cucumis sativus Cucsa.082250 I 0.000
Cucsa.116140 Cucumis sativus Cucsa.116140 I 0.000
Cucsa.365440 Cucumis sativus Cucsa.365440 I 0.000
Eucgr.C04155 Eucalyptus grandis Eucgr.C04155 I 0.000
Eucgr.H01993 Eucalyptus grandis Eucgr.H01993 I 0.000
Thhalv10004257m.g Eutrema salsugineum Thhalv10004257m.g I 0.000
Thhalv10008115m.g Eutrema salsugineum Thhalv10008115m.g I 0.000
gene30953-v1.0-hybrid Fragaria vesca gene30953-v1.0-hybrid I 0.000
GLYMA01G39040 Glycine max GLYMA01G39040 I 0.000
GLYMA04G21680 Glycine max GLYMA04G21680 I 0.000
GLYMA05G08150 Glycine max GLYMA05G08150 I 0.000
GLYMA06G23902 Glycine max GLYMA06G23902 I 0.000
GLYMA11G06230 Glycine max GLYMA11G06230 I 0.000
GLYMA17G12720 Glycine max GLYMA17G12720 I 0.000
Gorai.001G002800 Gossypium raimondii Gorai.001G002800 I 0.000
Gorai.008G185500 Gossypium raimondii Gorai.008G185500 I 0.000
Gorai.009G022100 Gossypium raimondii Gorai.009G022100 I 0.000
Gorai.010G067300 Gossypium raimondii Gorai.010G067300 I 0.000
MLOC_72007 Hordeum vulgare MLOC_72007 I 0.000
LPERR01G04660 Leersia perrieri LPERR01G04660 I 0.000
LPERR02G11880 Leersia perrieri LPERR02G11880 I 0.000
LPERR12G14470 Leersia perrieri LPERR12G14470 I 0.000
Lus10021699.g Linum usitatissimum Lus10021699.g I 0.000
Lus10034280.g Linum usitatissimum Lus10034280.g I 0.000
Lus10035043.g Linum usitatissimum Lus10035043.g I 0.000
Lus10041485.g Linum usitatissimum Lus10041485.g I 0.000
Lus10043304.g Linum usitatissimum Lus10043304.g I 0.000
MDP0000128135 Malus domestica MDP0000128135 I 0.000
cassava11434.m1 Manihot esculenta cassava11434.m1 I 0.000
cassava11986.valid.m1 Manihot esculenta cassava11986.valid.m1 I 0.000
cassava24190.valid.m1 Manihot esculenta cassava24190.valid.m1 I 0.000
MTR_4g113140 Medicago truncatula MTR_4g113140 I 0.000
mgf007637m Mimulus guttatus mgf007637m I 0.000
mgf023459m Mimulus guttatus mgf023459m I 0.000
GSMUA_Achr10G27180_001 Musa acuminata GSMUA_Achr10G27180_001 I 0.000
GSMUA_Achr10G28540_001 Musa acuminata GSMUA_Achr10G28540_001 I 0.000
GSMUA_Achr11G13410_001 Musa acuminata GSMUA_Achr11G13410_001 I 0.000
GSMUA_Achr6G05330_001 Musa acuminata GSMUA_Achr6G05330_001 I 0.000
GSMUA_Achr6G34680_001 Musa acuminata GSMUA_Achr6G34680_001 I 0.000
GSMUA_Achr8G18270_001 Musa acuminata GSMUA_Achr8G18270_001 I 0.000
OBART02G14690 Oryza barthii OBART02G14690 I 0.000
OBART12G17240 Oryza barthii OBART12G17240 I 0.000
OB01G14760 Oryza brachyantha OB01G14760 I 0.000
OB02G22950 Oryza brachyantha OB02G22950 I 0.000
ORGLA01G0045900 Oryza glaberrima ORGLA01G0045900 I 0.000
ORGLA02G0127400 Oryza glaberrima ORGLA02G0127400 I 0.000
ORGLA12G0148200 Oryza glaberrima ORGLA12G0148200 I 0.000
OGLUM01G05410 Oryza glumaepatula OGLUM01G05410 I 0.000
OGLUM02G14610 Oryza glumaepatula OGLUM02G14610 I 0.000
OGLUM12G18880 Oryza glumaepatula OGLUM12G18880 I 0.000
BGIOSGA002879 Oryza indica BGIOSGA002879 I 0.000
BGIOSGA037689 Oryza indica BGIOSGA037689 I 0.000
OLONG_018015 Oryza longistaminata OLONG_018015 I 0.000
OLONG_023667 Oryza longistaminata OLONG_023667 I 0.000
OMERI01G04960 Oryza meridionalis OMERI01G04960 I 0.000
OMERI02G14870 Oryza meridionalis OMERI02G14870 I 0.000
ONIVA01G05610 Oryza nivara ONIVA01G05610 I 0.000
ONIVA02G15910 Oryza nivara ONIVA02G15910 I 0.000
ONIVA12G16020 Oryza nivara ONIVA12G16020 I 0.000
OPUNC01G04800 Oryza punctata OPUNC01G04800 I 0.000
OPUNC02G13150 Oryza punctata OPUNC02G13150 I 0.000
OPUNC12G15670 Oryza punctata OPUNC12G15670 I 0.000
ORUFI01G05240 Oryza rufipogon ORUFI01G05240 I 0.000
ORUFI02G14900 Oryza rufipogon ORUFI02G14900 I 0.000
ORUFI12G19230 Oryza rufipogon ORUFI12G19230 I 0.000
OS01G0176700 Oryza sativa OS01G0176700 I 0.000
NIGT1 Oryza sativa OS02G0325600 D 0.000
OS12G0586300 Oryza sativa OS12G0586300 I 0.000
Pavir.Aa02952 Panicum virgatum Pavir.Aa02952 I 0.000
Pavir.Ab00626 Panicum virgatum Pavir.Ab00626 I 0.000
Pavir.Ca02525 Panicum virgatum Pavir.Ca02525 I 0.000
Pavir.J08752 Panicum virgatum Pavir.J08752 I 0.000
Pavir.J13382 Panicum virgatum Pavir.J13382 I 0.000
fgenesh1_pg.scaffold_166000054 Physcomitrella patens fgenesh1_pg.scaffold_166000054 I 0.000
POPTR_0006s16000 Populus trichocarpa POPTR_0006s16000 I 0.000
POPTR_0008s11630 Populus trichocarpa POPTR_0008s11630 I 0.000
POPTR_0018s06410 Populus trichocarpa POPTR_0018s06410 I 0.000
Pm027466 Prunus mume Pm027466 I 0.000
PRUPE_ppa016044mg Prunus persica PRUPE_ppa016044mg I 0.000
28883.m000751 Ricinus communis 28883.m000751 I 0.000
29807.m000474 Ricinus communis 29807.m000474 I 0.000
SapurV1A.0246s0200 Salix purpurea SapurV1A.0246s0200 I 0.000
SapurV1A.0512s0010 Salix purpurea SapurV1A.0512s0010 I 0.000
SapurV1A.1001s0050 Salix purpurea SapurV1A.1001s0050 I 0.000
SapurV1A.1984s0010 Salix purpurea SapurV1A.1984s0010 I 0.000
SELMODRAFT_402040 Selaginella moellendorffii SELMODRAFT_402040 I 0.000
SELMODRAFT_423260 Selaginella moellendorffii SELMODRAFT_423260 I 0.000
SELMODRAFT_66160 Selaginella moellendorffii SELMODRAFT_66160 I 0.000
Si001230m.g Setaria italica Si001230m.g I 0.000
Si019945m.g Setaria italica Si019945m.g I 0.000
Si022287m.g Setaria italica Si022287m.g I 0.000
Solyc05g009720.2 Solanum lycopersicum Solyc05g009720.2 I 0.000
Solyc12g006800.1 Solanum lycopersicum Solyc12g006800.1 I 0.000
PGSC0003DMG400000828 Solanum tuberosum PGSC0003DMG400000828 I 0.000
PGSC0003DMG400030389 Solanum tuberosum PGSC0003DMG400030389 I 0.000
Sb03g004090 Sorghum bicolor Sb03g004090 I 0.000
Sb08g003180 Sorghum bicolor Sb08g003180 I 0.000
Sb08g019720 Sorghum bicolor Sb08g019720 I 0.000
TCM_011857 Theobroma cacao TCM_011857 I 0.000
TCM_037970 Theobroma cacao TCM_037970 I 0.000
Traes_2BS_10A8CAB27 Triticum aestivum Traes_2BS_10A8CAB27 I 0.000
TRAES3BF056900070CFD_g Triticum aestivum TRAES3BF056900070CFD_g I 0.000
Traes_5BS_C9EA93E10 Triticum aestivum Traes_5BS_C9EA93E10 I 0.000
Traes_5DS_13C2391DC Triticum aestivum Traes_5DS_13C2391DC I 0.000
VIT_01s0011g03110 Vitis vinifera VIT_01s0011g03110 I 0.000
VIT_11s0016g04600 Vitis vinifera VIT_11s0016g04600 I 0.000
AC234520.1_FG003 Zea mays AC234520.1_FG003 I 0.000
GRMZM2G348238 Zea mays GRMZM2G348238 I 0.000