Pm005698 (Prunus mume)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 Pm005698 T355344_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY18
M02560_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7360 		0.868 0.831
WRKY18
M00900_2.00 		Arabidopsis thaliana
NVGTCNN
NNGACBN		 PBM
Franco-Zorrilla et al.(2014)
WRKY18 		0.868 0.831
WRKY18
M07416_2.00 		Arabidopsis thaliana
NNHRGTCAASR
YSTTGACYDNN		 Dap-seq
OMalley et al.(2016)
WRKY18_col_a 		0.868 0.831
WRKY18
M07417_2.00 		Arabidopsis thaliana
NNNHWAGTCAANR
YNTTGACTWDNNN		 Dap-seq
OMalley et al.(2016)
WRKY18_colamp_a 		0.868 0.831
WRKY18
M11465_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRKY18_Q2 		0.868 0.831
WRKY60
M02551_2.00 		Arabidopsis thaliana
NYGGTCAAMNN
NNKTTGACCRN		 PBM
Weirauch et al.(2014)
pTH7379 		0.866 0.814
WRKY40
M02548_2.00 		Arabidopsis thaliana
NRGTCAWN
NWTGACYN		 PBM
Weirauch et al.(2014)
pTH8398 		0.862 0.831
WRKY40
M07379_2.00 		Arabidopsis thaliana
NNNAAAGTCAAVR
YBTTGACTTTNNN		 Dap-seq
OMalley et al.(2016)
WRKY40_colamp_a 		0.862 0.831
WRKY40
M07380_2.00 		Arabidopsis thaliana
NNVAAAGTCAAVRNH
DNYBTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY40_col 		0.862 0.831
WRKY40
M08180_2.00 		Arabidopsis thaliana
NNAGTCAANN
NNTTGACTNN		 ChIP-seq
Mathelier et al.(2014)
MA1085.2 		0.862 0.831
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm005698 WRKY 169 227

Links

Other WRKY family TFs
Other Prunus mume TFs

407 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACYPI008958 Acyrthosiphon pisum ACYPI008958 N
AAEL009092 Aedes aegypti AAEL009092 N
AALB003420 Anopheles albimanus AALB003420 N
ADAC010420 Anopheles darlingi ADAC010420 N
AEPI009380 Anopheles epiroticus AEPI009380 N
AFAF012002 Anopheles farauti AFAF012002 N
AGAP001761 Anopheles gambiae AGAP001761 N
AMEM008456 Anopheles merus AMEM008456 N
ENSAMXG00000012483 Astyanax mexicanus ENSAMXG00000012483 N
e_gw.479.83.1 Branchiostoma floridae e_gw.479.83.1 N
estExt_gwp.C_860189 Branchiostoma floridae estExt_gwp.C_860189 N
Cflo_01607--XP_001123059.1_APIME Camponotus floridanus Cflo_01607--XP_001123059.1_APIME N
CLEC001936 Cimex lectularius CLEC001936 N
CpipJ_CPIJ012963 Culex pipiens CpipJ_CPIJ012963 N
CPIJ012963 Culex quinquefasciatus CPIJ012963 N
KGM_15429 Danaus plexippus KGM_15429 N
KGM_16996 Danaus plexippus KGM_16996 N
cers3b Danio rerio ENSDARG00000036337 N
YQE_11876 Dendroctonus ponderosae YQE_11876 N
ENSGACG00000002760 Gasterosteus aculeatus ENSGACG00000002760 N
HHAL005214-PA Halyomorpha halys HHAL005214-PA N
Hsal_14209--XP_001123059.1_APIME Harpegnathos saltator Hsal_14209--XP_001123059.1_APIME N
HMEL006147 Heliconius melpomene HMEL006147 N
HelroG82517 Helobdella robusta HelroG82517 N
ENSLOCG00000004390 Lepisosteus oculatus ENSLOCG00000004390 N
LDEC003623 Leptinotarsa decemlineata LDEC003623 N
LotgiG226091 Lottia gigantea LotgiG226091 N
MCINX005367 Melitaea cinxia MCINX005367 N
MCINX005366 Melitaea cinxia MCINX005366 N
ENSMICG00000014767 Microcebus murinus ENSMICG00000014767 N
CERS5 Oryzias latipes ENSORLG00000010219 N
ENSPFOG00000013551 Poecilia formosa ENSPFOG00000013551 N
RPRC008736 Rhodnius prolixus RPRC008736 N
ENSSHAG00000003870 Sarcophilus harrisii ENSSHAG00000003870 N
ENSSHAG00000001540 Sarcophilus harrisii ENSSHAG00000001540 N
SINV20227 Solenopsis invicta SINV20227 N
SINV24013 Solenopsis invicta SINV24013 N
cers4b Takifugu rubripes ENSTRUG00000000191 N
TC006052 Tribolium castaneum TC006052 N
cers3.L Xenopus laevis XB-GENE-6251639 N
L798_00373 Zootermopsis nevadensis L798_00373 N