gene13546-v1.0-hybrid (Fragaria vesca)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 gene13546-v1.0-hybrid T356209_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY70
M07399_2.00 		Arabidopsis thaliana
HAAAGTCAACGNN
NNCGTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY70_col 		0.821 0.644
WRKY46
M07395_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY46_col_a 		0.814 0.610
WRKY46
M07396_2.00 		Arabidopsis thaliana
HRAAGTCAACG
CGTTGACTTYD		 Dap-seq
OMalley et al.(2016)
WRKY46_colamp_a 		0.814 0.610
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
mrna13546.1-v1.0-hybrid WRKY 136 196

Links

Other WRKY family TFs
Other Fragaria vesca TFs

139 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000007513 Ailuropoda melanoleuca ENSAMEG00000007513 I
ENSACAG00000003497 Anolis carolinensis ENSACAG00000003497 I
ENSBTAP00000010016-D1 Bos grunniens ENSBTAP00000010016-D1 I
TERF2 Bos taurus ENSBTAG00000007617 I
TERF2 Callithrix jacchus ENSCJAG00000015339 I
TERF2 Canis familiaris ENSCAFG00000020267 I
TERF2 Cavia porcellus ENSCPOG00000003717 I
ENSCSAG00000004144 Chlorocebus sabaeus ENSCSAG00000004144 I
TERF2 Choloepus hoffmanni ENSCHOG00000010819 I
TERF2 Dasypus novemcinctus ENSDNOG00000014627 I
Terf2 Dipodomys ordii ENSDORG00000011208 I
TERF2 Echinops telfairi ENSETEG00000013553 I
TERF2 Equus caballus ENSECAG00000024534 I
ENSFCAG00000013579 Felis catus ENSFCAG00000013579 I
TERF2 Gorilla gorilla ENSGGOG00000004372 I
TERF2 Homo sapiens ENSG00000132604 I
ENSSTOG00000012882 Ictidomys tridecemlineatus ENSSTOG00000012882 I
ENSLOCG00000001317 Lepisosteus oculatus ENSLOCG00000001317 I
ENSP00000254942 Macaca fascicularis ENSP00000254942 I
TERF2 Macaca mulatta ENSMMUG00000016633 I
TERF2 Monodelphis domestica ENSMODG00000002766 I
ENSMPUG00000007352 Mustela putorius furo ENSMPUG00000007352 I
Terf2 Mus musculus ENSMUSG00000031921 D
Myotis_brandtii_TERF2_10022452 Myotis brandtii Myotis_brandtii_TERF2_10022452 I
TERF2 Myotis lucifugus ENSMLUG00000006584 I
ENSNLEG00000005506 Nomascus leucogenys ENSNLEG00000005506 I
TERF2 Ochotona princeps ENSOPRG00000006995 I
Ogr16822 Ophisaurus gracilis Ogr16822 N
TERF2 Ornithorhynchus anatinus ENSOANG00000002365 I
TERF2 Oryctolagus cuniculus ENSOCUG00000017662 I
TERF2 Otolemur garnettii ENSOGAG00000008071 I
ENSOARG00000003567 Ovis aries ENSOARG00000003567 I
TERF2 Pan troglodytes ENSPTRG00000008281 I
ENSPANG00000018001 Papio anubis ENSPANG00000018001 I
ENSPSIG00000011530 Pelodiscus sinensis ENSPSIG00000011530 I
TERF2 Procavia capensis ENSPCAG00000006534 I
TERF2 Pteropus vampyrus ENSPVAG00000015982 I
Terf2 Rattus norvegicus ENSRNOG00000020435 I
ENSSHAG00000013733 Sarcophilus harrisii ENSSHAG00000013733 I
TERF2 Sus scrofa ENSSSCG00000002762 I
ENSTSYG00000008563 Tarsius syrichta ENSTSYG00000008563 I
TERF2 Tupaia belangeri ENSTBEG00000011528 I
TERF2 Tursiops truncatus ENSTTRG00000010015 I
TERF2 Vicugna pacos ENSVPAG00000003993 I
terf2.L Xenopus laevis XB-GENE-990302 I
terf2 Xenopus tropicalis XB-GENE-990299 I