CIS-BP Database: Catalog of Inferred Sequence Binding Preferences

TF Information

Thhalv10008510m.g *(Eutrema salsugineum)* WRKY
Pfam ID	Interpro ID	Gene ID	CIS-BP ID	Sequence source
PF03106 (WRKY)	IPR003657	Thhalv10008510m.g	T357013_2.00	JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
No direct experiments
Motifs from related TFs
Name/Motif ID	Species	Forward	Reverse	Type/Study/Study ID	SR Score	DBD Identity
WRKY65 M07372_2.00	Arabidopsis thaliana	NWWAGTCAACG	CGTTGACTWWN	Dap-seq OMalley et al.(2016) WRKY65_col_a	0.897	0.966
WRKY65 M07373_2.00	Arabidopsis thaliana	NAAAGTCAACGN	NCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY65_colamp_a	0.897	0.966
WRKY14 M00731_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Chang et al.(2013) pTH7570	0.887	0.831
WRKY14 M07375_2.00	Arabidopsis thaliana	NAAAGTCAACGNN	NNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_col_a	0.887	0.831
WRKY14 M07376_2.00	Arabidopsis thaliana	NAAAGTCAACGNH	DNCGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY14_colamp_a	0.887	0.831
WRKY27 M02566_2.00	Arabidopsis thaliana	NNGTCHDNN	NNHDGACNN	PBM Weirauch et al.(2014) pTH8188	0.887	0.763
WRKY27 M07430_2.00	Arabidopsis thaliana	MAAAGTCAACKNH	DNMGTTGACTTTK	Dap-seq OMalley et al.(2016) WRKY27_col_a	0.887	0.763
WRKY27 M07431_2.00	Arabidopsis thaliana	HAAAGTCAACKNH	DNMGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY27_colamp_a	0.887	0.763
WRKY22 M02557_2.00	Arabidopsis thaliana	NNNKTMHDNN	NNHDKAMNNN	PBM Weirauch et al.(2014) pTH7320	0.883	0.797
WRKY22 M07400_2.00	Arabidopsis thaliana	AAAAGTCAACKNH	DNMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY22_colamp_a	0.883	0.797
WRKY22 M07401_2.00	Arabidopsis thaliana	NAAAGTCAACKNH	DNMGTTGACTTTN	Dap-seq OMalley et al.(2016) WRKY22_col	0.883	0.797
WRKY29 M02558_2.00	Arabidopsis thaliana	NNNGTCHDNN	NNHDGACNNN	PBM Weirauch et al.(2014) pTH9604	0.868	0.746
WRKY29 M07410_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY29_col_a	0.868	0.746
WRKY29 M07411_2.00	Arabidopsis thaliana	HWWAGTCAAMDNN	NNHKTTGACTWWD	Dap-seq OMalley et al.(2016) WRKY29_colamp_a	0.868	0.746
WRKY21 M02553_2.00	Arabidopsis thaliana	NNRGTCAAMN	NKTTGACYNN	PBM Weirauch et al.(2014) pTH7422	0.868	0.695
WRKY21 M07389_2.00	Arabidopsis thaliana	HAAAGTCAACNNH	DNNGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_colamp_a	0.868	0.695
WRKY21 M07390_2.00	Arabidopsis thaliana	HAAAGTCAACK	MGTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY21_col	0.868	0.695
Q40828_PETCR M11467_2.00	Petroselinum crispum	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY_Q2	0.860	0.695
WRKY15 M02549_2.00	Arabidopsis thaliana	NRGTCAAMNN	NNKTTGACYN	PBM Weirauch et al.(2014) pTH7602	0.859	0.678
WRKY15 M07383_2.00	Arabidopsis thaliana	AAAAGTCAACKN	NMGTTGACTTTT	Dap-seq OMalley et al.(2016) WRKY15_colamp_a	0.859	0.678
WRKY15 M07384_2.00	Arabidopsis thaliana	NWAAGTCAACB	VGTTGACTTWN	Dap-seq OMalley et al.(2016) WRKY15_col_b	0.859	0.678
WRKY7 M07412_2.00	Arabidopsis thaliana	NNDDDNNNNMAAAGTCAACGV	BCGTTGACTTTKNNNNHHHNN	Dap-seq OMalley et al.(2016) WRKY7_colamp_a	0.857	0.695
WRKY7 M07413_2.00	Arabidopsis thaliana	NAAAAGTCAACKNN	NNMGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY7_col	0.857	0.695
WRKY11 M02559_2.00	Arabidopsis thaliana	NDGTCAAHNN	NNDTTGACHN	PBM Weirauch et al.(2014) pTH8091	0.853	0.644
WRKY11 M07415_2.00	Arabidopsis thaliana	NHAAAGTCAACBNH	DNVGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY11_col_a	0.853	0.644
WRKY11 M11464_2.00	Arabidopsis thaliana	Transfac license required	Transfac license required	Transfac Matys et al.(2006) P$WRKY11_Q2	0.853	0.644
WRKY17 M02550_2.00	Arabidopsis thaliana	NNDGTCAAHN	NDTTGACHNN	PBM Weirauch et al.(2014) pTH8088	0.853	0.644
WRKY17 M07385_2.00	Arabidopsis thaliana	NHAAAGTCAACRNN	NNYGTTGACTTTDN	Dap-seq OMalley et al.(2016) WRKY17_col_a	0.853	0.644
WRKY17 M07386_2.00	Arabidopsis thaliana	NMAAAGTCAACGN	NCGTTGACTTTKN	Dap-seq OMalley et al.(2016) WRKY17_colamp_a	0.853	0.644
WRKY48 M02565_2.00	Arabidopsis thaliana	NNVGTCADNN	NNHTGACBNN	PBM Weirauch et al.(2014) pTH7552	0.835	0.559
WRKY8 M02564_2.00	Arabidopsis thaliana	NRGTCAAHN	NDTTGACYN	PBM Weirauch et al.(2014) pTH7554	0.835	0.559
WRKY28 M07406_2.00	Arabidopsis thaliana	HAAAGTCAAMNNH	DNNKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY28_col_a	0.835	0.559
WRKY28 M07407_2.00	Arabidopsis thaliana	VAAAGTCAAMG	CKTTGACTTTB	Dap-seq OMalley et al.(2016) WRKY28_colamp_a	0.835	0.559
WRKY8 M07428_2.00	Arabidopsis thaliana	NAAAAGTCAACRNHW	WDNYGTTGACTTTTN	Dap-seq OMalley et al.(2016) WRKY8_colamp_a	0.835	0.559
WRKY8 M07429_2.00	Arabidopsis thaliana	NNVAAAGTCAACRNH	DNYGTTGACTTTBNN	Dap-seq OMalley et al.(2016) WRKY8_col	0.835	0.559
WRKY71 M07374_2.00	Arabidopsis thaliana	HAAAGTCAAMN	NKTTGACTTTD	Dap-seq OMalley et al.(2016) WRKY71_col_a	0.830	0.542
ZAP1 M00982_2.00	Arabidopsis thaliana	NRGTCAAN	NTTGACYN	PBM Lindemose et al.(2014) WRKY1	0.827	0.576
WRKY57 M02547_2.00	Arabidopsis thaliana	NNRGTCAAHN	NDTTGACYNN	PBM Weirauch et al.(2014) pTH7917	0.819	0.508
WRKY23 M02556_2.00	Arabidopsis thaliana	RGTCAACG	CGTTGACY	PBM Weirauch et al.(2014) pTH7387	0.817	0.492
WRKY23 M01089_2.00	Arabidopsis thaliana	NRGTCAAM	KTTGACYN	PBM Sullivan et al.(2014) pTH7671	0.817	0.492
WRKY59 M07382_2.00	Arabidopsis thaliana	NDWWAGTCAAMN	NKTTGACTWWHN	Dap-seq OMalley et al.(2016) WRKY59_col_a	0.816	0.525
fgenesh1_pg.C_Chr_11.0001000193 M02570_2.00	Ostreococcus tauri	NRGTCARNN	NNYTGACYN	PBM Weirauch et al.(2014) pTH9432	0.811	0.525
For this family, TFs with SR scores > 0.808* will likely have a similar motif*

DNA Binding Domains

Protein ID	Domain	From	To	Sequence
Thhalv10008510m	WRKY	71	129	SDSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTCDHNHP
Thhalv10008514m	WRKY	70	128	SDSWAWRKYGQKPIKGSPYPRGYYRCSSTKGCPARKQVERSRDDPTMILITYTCDHNHP

Links
Other WRKY family TFs
Other *Eutrema salsugineum* TFs

1577 Related TFs

Name	Species	Gene ID	Motif Evidence	SR Score	Action
ENSAMEG00000001225	Ailuropoda melanoleuca	ENSAMEG00000001225	N	0.000
ENSBTAP00000032885-D1	Bos grunniens	ENSBTAP00000032885-D1	N	0.000
ZNF512	Bos taurus	ENSBTAG00000003902	N	0.000
ZNF512	Callithrix jacchus	ENSCJAG00000009180	N	0.000
ZNF512	Cavia porcellus	ENSCPOG00000004356	N	0.000
ENSCSAG00000010138	Chlorocebus sabaeus	ENSCSAG00000010138	N	0.000
Zfp512	Dipodomys ordii	ENSDORG00000012164	N	0.000
ZNF512	Echinops telfairi	ENSETEG00000015916	N	0.000
ZNF512	Equus caballus	ENSECAG00000014118	N	0.000
ZNF512	Felis catus	ENSFCAG00000022212	N	0.000
ZNF512	Gorilla gorilla	ENSGGOG00000009586	N	0.000
ZNF512	Homo sapiens	ENSG00000243943	N	0.000
ENSSTOG00000006337	Ictidomys tridecemlineatus	ENSSTOG00000006337	N	0.000
ZNF512	Loxodonta africana	ENSLAFG00000011172	N	0.000
ENSMMUP00000025956	Macaca fascicularis	ENSMMUP00000025956	N	0.000
ZNF512	Macaca mulatta	ENSMMUG00000019742	N	0.000
ENSMPUG00000018002	Mustela putorius furo	ENSMPUG00000018002	N	0.000
Myotis_brandtii_ZNF512_10031171	Myotis brandtii	Myotis_brandtii_ZNF512_10031171	N	0.000
ZNF512	Myotis lucifugus	ENSMLUG00000011855	N	0.000
ENSNLEG00000003871	Nomascus leucogenys	ENSNLEG00000003871	N	0.000
ZNF512	Ochotona princeps	ENSOPRG00000012973	N	0.000
ZNF512	Oryctolagus cuniculus	ENSOCUG00000013611	N	0.000
ZNF512	Otolemur garnettii	ENSOGAG00000014049	N	0.000
ENSOARG00000019385	Ovis aries	ENSOARG00000019385	N	0.000
ENSPANG00000000664	Papio anubis	ENSPANG00000000664	N	0.000
ENSPPYG00000012540	Pongo abelii	ENSPPYG00000012540	N	0.000
ZNF512	Pteropus vampyrus	ENSPVAG00000015218	N	0.000
ZNF512	Sus scrofa	ENSSSCG00000008545	N	0.000
ENSTSYG00000006511	Tarsius syrichta	ENSTSYG00000006511	N	0.000
ZNF512	Tursiops truncatus	ENSTTRG00000012529	N	0.000
ZNF512	Vicugna pacos	ENSVPAG00000001994	N	0.000

Thhalv10008510m.g (Eutrema salsugineum) WRKY

TF Information

Directly determined binding motifs

Motifs from related TFs

DNA Binding Domains

Links

1577 Related TFs

Thhalv10008510m.g **(Eutrema salsugineum)
WRKY**