chr1.CM0133.390.nc (Lotus japonicus)
WRKY

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03106 (WRKY) IPR003657 chr1.CM0133.390.nc T357108_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WRKY50
M07424_2.00 		Arabidopsis thaliana
NNAAAAGTCAAMN
NKTTGACTTTTNN		 Dap-seq
OMalley et al.(2016)
WRKY50_col_a 		0.849 0.810
WRKY50
M07425_2.00 		Arabidopsis thaliana
NWAAGTCAANN
NNTTGACTTWN		 Dap-seq
OMalley et al.(2016)
WRKY50_colamp_a 		0.849 0.810
PK25870.1
M01325_2.00 		Cannabis sativa
NRGTCAAM
KTTGACYN		 PBM
Lambert et al.(2019)
pTH10156 		0.818 0.741
WRKY51
M02568_2.00 		Arabidopsis thaliana
NNRGTCAANN
NNTTGACYNN		 PBM
Weirauch et al.(2014)
pTH7478 		0.817 0.759
WRKY48
M02565_2.00 		Arabidopsis thaliana
NNVGTCADNN
NNHTGACBNN		 PBM
Weirauch et al.(2014)
pTH7552 		0.816 0.707
WRKY71
M07374_2.00 		Arabidopsis thaliana
HAAAGTCAAMN
NKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY71_col_a 		0.815 0.655
WRKY28
M07406_2.00 		Arabidopsis thaliana
HAAAGTCAAMNNH
DNNKTTGACTTTD		 Dap-seq
OMalley et al.(2016)
WRKY28_col_a 		0.813 0.638
WRKY28
M07407_2.00 		Arabidopsis thaliana
VAAAGTCAAMG
CKTTGACTTTB		 Dap-seq
OMalley et al.(2016)
WRKY28_colamp_a 		0.813 0.638
WRKY8
M02564_2.00 		Arabidopsis thaliana
NRGTCAAHN
NDTTGACYN		 PBM
Weirauch et al.(2014)
pTH7554 		0.813 0.621
WRKY8
M07428_2.00 		Arabidopsis thaliana
NAAAAGTCAACRNHW
WDNYGTTGACTTTTN		 Dap-seq
OMalley et al.(2016)
WRKY8_colamp_a 		0.813 0.621
WRKY8
M07429_2.00 		Arabidopsis thaliana
NNVAAAGTCAACRNH
DNYGTTGACTTTBNN		 Dap-seq
OMalley et al.(2016)
WRKY8_col 		0.813 0.621
For this family, TFs with SR scores > 0.808 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
chr1.CM0133.390.nc WRKY 106 175

Links

Other WRKY family TFs
Other Lotus japonicus TFs

382 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action